C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU domain, class 4, transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025374 Pou4f3-001 ENSMUSG00000024497 10090 + 18:42394539-42397249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaTestisENSMUST00000025374
Transcript ID Brain Liver Placenta Testis
ENSMUST00000025374 1.109±0.94 0.030±0.00 0.031±0.00 0.018±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J5 CIL_0001J5_0003 CGP 18:42275353-42397249
CIL_0001AK CIL_0001AK_0002 CGP 18:42394539-42575551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005667 IC transcription factor complex
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0007605 IGI sensory perception of sound
GO:0021562 IMP vestibulocochlear nerve development
GO:0031290 IGI retinal ganglion cell axon guidance
GO:0042472 IMP inner ear morphogenesis
GO:0042491 IMP auditory receptor cell differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048675 IGI axon extension
GO:0048839 IMP inner ear development
GO:0050885 IGI neuromuscular process controlling balance
GO:0051402 IMP neuron apoptotic process
GO:0060113 IMP inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000149175 pou4f3-001 protein_coding Danio_rerio 0 497
ENST00000230732 POU4F3-001 protein_coding Homo_sapiens 0 1522
ENST00000281321 POU4F2-001 protein_coding Homo_sapiens 0 436
ENST00000377208 POU4F1-001 protein_coding Homo_sapiens 0 470

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