C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 163
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281924 TMEM163-001 ENSG00000152128 9606 - 2:134455759-134719000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281924 1.166±0.00 4.811±0.00 0.211±0.00 9.277±0.00 1.184±0.00 0.363±0.08 0.361±0.34 2.734±0.00 0.022±0.00 2.242±1.08 0.037±0.00 2.336±1.31 1.081±0.62 6.230±2.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S3 CIL_0003S3_0002 CGP 2:134119983-134719000
CIL_0007T0 CIL_0007T0_0001 VISTA 2:134222086-134823917
CIL_0001VW CIL_0001VW_0001 CGP 2:134455759-134902034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 ISS zinc ion binding
GO:0030054 IEA cell junction
GO:0030285 ISS integral component of synaptic vesicle membrane
GO:0031901 ISS early endosome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160616 Tmem163-201 protein_coding Mus_musculus 0 944
ENSMUST00000185560 Tmem163-001 protein_coding Mus_musculus 0 944
ENSMUST00000027585 Tmem163-004 nonsense_mediated_decay Mus_musculus 0 944
ENSMUST00000162406 Tmem163-002 processed_transcript Mus_musculus 0 490
ENSMUST00000160111 Tmem163-003 retained_intron Mus_musculus 0 340

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