C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007T0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1728 VISTA 9606 2:134222086-134823917
GeneTranscriptPositionBiotype
ENSG00000152127 (MGAT5)
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 		ENST00000281923 (MGAT5-201) 134254259-134454620 protein_coding
ENST00000409645 (MGAT5-001) 134120182-134454621 protein_coding
ENST00000468758 (MGAT5-004) 134119983-134254644 processed_transcript
ENST00000481801 (MGAT5-003) 134119983-134254606 processed_transcript
ENST00000488365 (MGAT5-002) 134253104-134254514 processed_transcript
ENSG00000152128 (TMEM163)
transmembrane protein 163 		ENST00000281924 (TMEM163-001) 134455759-134719000 protein_coding
ENST00000467316 (TMEM163-003) 134455760-134459274 retained_intron
ENST00000476823 (TMEM163-002) 134455764-134470036 retained_intron
ENSG00000234060 (EDDM3CP)
epididymal protein 3C, pseudogene 		ENST00000415977 (EDDM3CP-001) 134319654-134320078 processed_pseudogene
ENSG00000234682 (AC110620.2)
 ENST00000452925 (AC110620.2-001) 134797169-134797879 processed_pseudogene
CIL_0007T0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1728 VISTA 10090 1:127230775-127832241
GeneTranscriptPositionBiotype
ENSMUSG00000026348 (Acmsd)
amino carboxymuconate semialdehyde decarboxylase 		ENSMUST00000038006 (Acmsd-001) 127729413-127767978 protein_coding
ENSMUST00000186537 (Acmsd-002) 127756757-127767978 processed_transcript
ENSMUSG00000026349 (Ccnt2)
cyclin T2 		ENSMUST00000027587 (Ccnt2-001) 127774164-127808061 protein_coding
ENSMUST00000112570 (Ccnt2-002) 127774164-127805932 protein_coding
ENSMUST00000125760 (Ccnt2-006) 127774164-127793589 retained_intron
ENSMUST00000126850 (Ccnt2-004) 127774164-127795800 retained_intron
ENSMUST00000143513 (Ccnt2-007) 127774164-127798401 retained_intron
ENSMUST00000149760 (Ccnt2-003) 127774164-127795800 retained_intron
ENSMUST00000153359 (Ccnt2-005) 127796571-127808061 processed_transcript
ENSMUSG00000036155 (Mgat5)
mannoside acetylglucosaminyltransferase 5 		ENSMUST00000038361 (Mgat5-001) 127205018-127488336 protein_coding
ENSMUST00000171405 (Mgat5-201) 127306762-127483704 protein_coding
ENSMUST00000189427 (Mgat5-002) 127205015-127388212 retained_intron
ENSMUST00000190921 (Mgat5-003) 127205028-127398792 retained_intron
ENSMUSG00000051590 (Map3k19)
mitogen-activated protein kinase kinase kinase 19 		ENSMUST00000061512 (Map3k19-001) 127815271-127840321 protein_coding
ENSMUST00000187653 (Map3k19-004) 127815253-127840321 protein_coding
ENSMUST00000189398 (Map3k19-002) 127815262-127840321 protein_coding
ENSMUST00000191333 (Map3k19-003) 127815262-127840321 protein_coding
ENSMUSG00000099471 (RP23-323H18.3)
predicted gene 8451 		ENSMUST00000170338 (RP23-323H18.3-001) 127282662-127283108 processed_pseudogene
ENSMUSG00000102014 (RP24-137J17.2)
RIKEN cDNA 2900009J06 gene 		ENSMUST00000185310 (RP24-137J17.2-002) 127753616-127774092 antisense
ENSMUST00000188163 (RP24-137J17.2-001) 127753616-127774054 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007T0_0001ENSG00000152127ENST00000281923ENST00000409645ENST00000468758ENST00000481801ENST00000488365ENSG00000152128ENST00000281924ENST00000467316ENST00000476823ENSG00000234060ENST00000415977ENSG00000234682ENST00000452925CIL_0007T0_0002ENSMUSG00000026348ENSMUST00000038006ENSMUST00000186537ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000125760ENSMUST00000126850ENSMUST00000143513ENSMUST00000149760ENSMUST00000153359ENSMUSG00000036155ENSMUST00000038361ENSMUST00000171405ENSMUST00000189427ENSMUST00000190921ENSMUSG00000051590ENSMUST00000061512ENSMUST00000187653ENSMUST00000189398ENSMUST00000191333ENSMUSG00000099471ENSMUST00000170338ENSMUSG00000102014ENSMUST00000185310ENSMUST00000188163
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007T0_0001ENSG00000152127ENST00000281923ENST00000409645ENSG00000152128ENST00000281924ENST00000467316ENST00000476823ENSG00000234060ENST00000415977ENSG00000234682ENST00000452925CIL_0007T0_0002ENSMUSG00000026348ENSMUST00000038006ENSMUST00000186537ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000143513ENSMUST00000153359ENSMUSG00000036155ENSMUST00000038361ENSMUST00000171405ENSMUSG00000051590ENSMUST00000061512ENSMUST00000187653ENSMUST00000189398ENSMUST00000191333ENSMUSG00000099471ENSMUST00000170338ENSMUSG00000102014ENSMUST00000185310ENSMUST00000188163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152127 ENST00000281923 6.018±0.00 7.214±0.00 N/A 1.837±0.00 2.347±1.44 4.288±0.67 8.071±0.00 7.493±0.00 1.742±0.21 5.370±0.00 0.345±0.14 7.832±1.33 8.400±4.03 3.612±1.47
ENST00000409645 N/A 3.426±0.00 1.098±0.00 1.749±0.00 1.186±0.00 N/A 3.437±1.94 0.714±0.31 N/A N/A N/A 5.003±0.00 1.335±0.00 N/A
ENST00000468758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152128 ENST00000281924 1.166±0.00 4.811±0.00 0.211±0.00 9.277±0.00 1.184±0.00 0.363±0.08 0.361±0.34 2.734±0.00 0.022±0.00 2.242±1.08 0.037±0.00 2.336±1.31 1.081±0.62 6.230±2.64
ENST00000467316 0.114±0.00 0.957±0.00 N/A N/A 0.267±0.05 N/A N/A N/A N/A N/A N/A 0.323±0.14 0.185±0.00 1.069±0.00
ENST00000476823 N/A N/A N/A N/A 0.097±0.04 0.019±0.00 N/A N/A 0.054±0.00 0.236±0.00 N/A N/A N/A N/A
ENSG00000234060 ENST00000415977 N/A N/A 0.374±0.00 0.078±0.05 N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A
ENSG00000234682 ENST00000452925 N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026348 ENSMUST00000038006 N/A N/A N/A N/A N/A N/A N/A 48.479±2.62 4.676±1.79 0.057±0.00 N/A N/A N/A 0.061±0.03
ENSMUST00000186537 0.091±0.01 0.156±0.00 0.043±0.00 0.089±0.02 0.105±0.05 0.141±0.07 0.088±0.07 N/A 3.657±1.82 0.061±0.01 0.027±0.01 0.083±0.04 0.192±0.09 0.043±0.00
ENSMUSG00000026349 ENSMUST00000027587 N/A 1.761±0.59 7.269±1.33 10.655±5.84 4.357±1.08 2.369±0.99 1.870±0.91 2.294±0.64 2.960±1.98 3.416±0.41 1.762±0.23 2.417±0.77 2.389±0.00 0.424±0.28
ENSMUST00000112570 4.788±0.78 3.239±0.83 6.467±0.36 3.464±1.29 5.044±0.63 5.189±1.60 2.768±0.72 2.458±0.82 4.105±2.73 6.259±1.68 2.135±0.27 7.535±2.23 6.058±0.53 1.792±0.67
ENSMUST00000125760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143513 9.992±0.00 7.137±0.56 N/A N/A 8.415±0.80 7.784±0.00 N/A N/A 3.498±0.00 N/A N/A N/A N/A 3.232±0.00
ENSMUST00000149760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153359 3.063±0.73 2.351±0.48 3.640±0.18 6.350±0.00 3.343±0.37 2.633±0.59 1.421±0.09 1.748±0.41 2.659±1.37 4.125±1.02 1.956±0.36 2.999±0.99 1.732±0.16 0.805±0.28
ENSMUSG00000036155 ENSMUST00000038361 3.581±1.66 2.316±0.43 5.669±1.32 10.161±3.67 3.078±1.08 12.341±1.75 1.978±0.80 4.779±1.12 0.771±0.32 3.158±0.70 0.108±0.04 5.940±1.78 5.183±3.09 2.108±2.07
ENSMUST00000171405 N/A N/A N/A 7.980±0.00 N/A N/A N/A N/A N/A N/A N/A 4.993±0.00 5.994±0.16 2.773±0.26
ENSMUST00000189427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000051590 ENSMUST00000061512 0.050±0.00 0.032±0.01 N/A 0.070±0.03 0.305±0.00 0.030±0.00 0.038±0.00 N/A 0.019±0.01 0.512±0.00 N/A 0.640±0.42 N/A N/A
ENSMUST00000187653 0.082±0.00 0.049±0.00 0.026±0.00 0.327±0.28 N/A 0.056±0.00 0.027±0.00 0.030±0.01 0.003±0.00 0.122±0.00 0.020±0.01 0.483±0.20 0.012±0.00 0.019±0.01
ENSMUST00000189398 0.070±0.00 0.108±0.08 N/A N/A 0.610±0.15 0.092±0.07 0.066±0.05 0.058±0.03 0.037±0.03 0.805±0.23 0.017±0.00 0.885±0.33 0.012±0.00 N/A
ENSMUST00000191333 0.129±0.00 N/A 0.021±0.00 N/A 0.250±0.01 0.217±0.10 0.186±0.00 0.060±0.00 N/A N/A N/A 1.385±0.13 N/A N/A
ENSMUSG00000099471 ENSMUST00000170338 0.245±0.10 N/A 11.424±0.47 3.237±2.55 0.280±0.07 0.566±0.15 0.192±0.09 0.294±0.19 3.289±5.77 0.260±0.10 0.336±0.08 0.542±0.29 0.331±0.06 0.188±0.09
ENSMUSG00000102014 ENSMUST00000185310 0.082±0.00 0.369±0.00 0.189±0.05 0.259±0.00 N/A 0.107±0.00 N/A N/A N/A 0.186±0.00 0.314±0.07 0.242±0.00 N/A N/A
ENSMUST00000188163 0.353±0.04 0.173±0.00 0.618±0.08 1.317±0.63 0.213±0.08 N/A 0.252±0.12 N/A N/A 0.109±0.00 1.286±0.40 1.700±0.83 0.671±0.20 0.656±0.29

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