C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crystallin, gamma C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000282141 CRYGC-001 ENSG00000163254 9606 - 2:208128137-208129830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000282141
Transcript ID Testis
ENST00000282141 0.762±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AK CIL_0000AK_000Z CGP 2:208121607-208129830
CIL_0000AK CIL_0000AK_0010 CGP 2:208128137-208146168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001654 IEA eye development
GO:0005212 NAS structural constituent of eye lens
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007601 IMP visual perception
GO:0043010 IEA camera-type eye development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087359 Cryge-001 protein_coding Mus_musculus 0 418
ENSMUST00000061497 Cryga-001 protein_coding Mus_musculus 0 403
ENSMUST00000154012 Cryga-002 retained_intron Mus_musculus 0 392
ENSMUST00000045028 Crygd-001 protein_coding Mus_musculus 0 388
ENSMUST00000027082 Crygf-001 protein_coding Mus_musculus 0 388
ENSMUST00000114027 Crygf-002 protein_coding Mus_musculus 0 348
ENSMUST00000127762 Crygd-002 retained_intron Mus_musculus 0 222

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