C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000282701 BMP3-001 ENSG00000152785 9606 + 4:81030965-81057531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282701
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282701 0.969±0.00 0.056±0.00 0.032±0.00 0.051±0.02 0.227±0.12 2.942±1.26 0.024±0.01 0.212±0.08 0.459±0.45 1.664±1.30 0.028±0.00 0.919±1.02 0.007±0.00 0.219±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UO CIL_0005UO_0002 CGP 4:80335720-81057531
CIL_00052T CIL_00052T_0002 CGP 4:81030965-81215117

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001503 IEA ossification
GO:0005102 TAS receptor binding
GO:0005125 IEA cytokine activity
GO:0005615 IEA extracellular space
GO:0007267 TAS cell-cell signaling
GO:0008083 IEA growth factor activity
GO:0030154 IEA cell differentiation
GO:0040007 IEA growth
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051216 IEA cartilage development
GO:0070062 IDA extracellular vesicular exosome
GO:0070700 IDA BMP receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031278 Bmp3-201 protein_coding Mus_musculus 0 1188
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000008 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00003 57

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