C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, aminophospholipid transporter, class I, type 8B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283684 ATP8B1-001 ENSG00000081923 9606 - 18:57646426-57731807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyMuscleOvaryPlacentaTestisENST00000283684
Transcript ID Adipose Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000283684 2.116±0.00 1.986±0.00 0.878±0.57 1.112±0.00 0.415±0.00 2.119±0.88 1.745±0.05 1.617±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OE CIL_0006OE_0001 CGP 18:57600656-57803101
CIL_0006OF CIL_0006OF_0001 CGP 18:57646426-58401540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA:TAS phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006855 IDA drug transmembrane transport
GO:0015721 NAS bile acid and bile salt transport
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0032534 IMP regulation of microvillus assembly
GO:0034220 TAS ion transmembrane transport
GO:0045332 IEA:IDA phospholipid translocation
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025482 Atp8b1-201 protein_coding Mus_musculus 0 4257
ENSDART00000086492 atp8b1-201 protein_coding Danio_rerio 0 272
ENSDART00000137844 atp8b1-001 protein_coding Danio_rerio 0 272
ENSMUST00000107937 Atp8b5-005 nonsense_mediated_decay Mus_musculus 0 257
ENSMUST00000107942 Atp8b5-001 protein_coding Mus_musculus 0 257

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