C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nei endonuclease VIII-like 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284503 NEIL2-001 ENSG00000154328 9606 + 8:11769739-11787346 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000284503
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000284503 2.716±0.00 2.951±0.00 0.190±0.00 3.291±0.00 1.214±0.00 3.527±0.00 0.547±0.06 1.266±1.03 1.808±0.15 2.368±1.79 1.045±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y4 CIL_0008Y4_0001 VISTA 8:11271783-11873892
CIL_000919 CIL_000919_0001 VISTA 8:11446673-12047186
CIL_0007PQ CIL_0007PQ_0001 VISTA 8:11649159-12249913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003676 IEA nucleic acid binding
GO:0003684 IEA damaged DNA binding
GO:0003906 IEA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005876 IEA spindle microtubule
GO:0006281 IEA DNA repair
GO:0006284 IEA base-excision repair
GO:0006289 IEA nucleotide-excision repair
GO:0008017 IEA microtubule binding
GO:0008270 IEA zinc ion binding
GO:0015630 IEA microtubule cytoskeleton
GO:0016799 IEA hydrolase activity, hydrolyzing N-glycosyl compounds

Homologs

No Homologs available.

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