C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxidoreductase NAD-binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285083 OXNAD1-001 ENSG00000154814 9606 + 3:16265199-16306087 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000285083
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000285083 3.365±0.00 1.106±0.00 4.949±0.00 0.507±0.16 1.356±0.00 0.741±0.00 0.233±0.00 1.296±0.72 0.429±0.06 0.321±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HO CIL_0004HO_0001 CGP 3:16257978-16350299
CIL_0002VD CIL_0002VD_0002 CGP 3:16265199-16514026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022462 Oxnad1-001 protein_coding Mus_musculus 0 915
ENSMUST00000165523 Oxnad1-005 nonsense_mediated_decay Mus_musculus 0 409
ENSMUST00000170519 Oxnad1-009 nonsense_mediated_decay Mus_musculus 0 387
ENSMUST00000164868 Oxnad1-002 nonsense_mediated_decay Mus_musculus 0 300
ENSMUST00000169078 Oxnad1-003 retained_intron Mus_musculus 0 252

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