C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154813-ENSG00000154814 CGP 9606 3:16257978-16350299
GeneTranscriptPositionBiotype
ENSG00000131378 (RFTN1)
raftlin, lipid raft linker 1 		ENST00000334133 (RFTN1-001) 16315856-16513706 protein_coding
ENST00000431547 (RFTN1-005) 16409473-16514026 protein_coding
ENST00000432519 (RFTN1-002) 16315845-16482865 protein_coding
ENST00000441460 (RFTN1-007) 16378095-16512922 protein_coding
ENST00000449415 (RFTN1-008) 16378095-16512904 protein_coding
ENST00000451036 (RFTN1-006) 16377719-16513374 protein_coding
ENST00000453536 (RFTN1-009) 16409428-16513522 nonsense_mediated_decay
ENST00000470458 (RFTN1-010) 16378072-16472599 processed_transcript
ENST00000483671 (RFTN1-003) 16316530-16370966 processed_transcript
ENST00000484752 (RFTN1-004) 16378053-16484835 processed_transcript
ENST00000495666 (RFTN1-011) 16377893-16434770 processed_transcript
ENST00000607320 (RFTN1-012) 16313574-16326867 nonsense_mediated_decay
ENSG00000154813 (DPH3)
diphthamide biosynthesis 3 		ENST00000285082 (DPH3-003) 16259910-16264777 processed_transcript
ENST00000383775 (DPH3-002) 16257979-16264969 protein_coding
ENST00000462982 (DPH3-004) 16260424-16264587 processed_transcript
ENST00000488423 (DPH3-001) 16257978-16264972 protein_coding
ENSG00000154814 (OXNAD1)
oxidoreductase NAD-binding domain containing 1 		ENST00000285083 (OXNAD1-001) 16265199-16306087 protein_coding
ENST00000435829 (OXNAD1-006) 16265210-16337315 protein_coding
ENST00000442255 (OXNAD1-003) 16265207-16303983 nonsense_mediated_decay
ENST00000452581 (OXNAD1-002) 16265233-16301786 nonsense_mediated_decay
ENST00000486267 (OXNAD1-005) 16265232-16271195 retained_intron
ENST00000605932 (OXNAD1-007) 16265202-16337361 protein_coding
ENST00000606098 (OXNAD1-008) 16265466-16350299 protein_coding
ENST00000607329 (OXNAD1-009) 16347597-16349263 processed_transcript
ENSG00000270739 (RP11-608O8.2)
 ENST00000604305 (RP11-608O8.2-001) 16275060-16276632 processed_pseudogene
ENSG00000271964 (RP11-415F23.2)
 ENST00000607464 (RP11-415F23.2-001) 16314439-16314987 antisense
ENSG00000272498 (RP11-415F23.3)
 ENST00000607363 (RP11-415F23.3-001) 16339308-16339871 antisense
ENSG00000272529 (RP11-415F23.4)
 ENST00000606713 (RP11-415F23.4-001) 16345126-16346440 antisense
CIL_0004HO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021905-ENSMUSG00000021906 CGP 10090 14:32080566-32103202
GeneTranscriptPositionBiotype
ENSMUSG00000021905 (Dph3)
diphthamine biosynthesis 3 		ENSMUST00000022461 (Dph3-002) 32080566-32085609 protein_coding
ENSMUST00000067955 (Dph3-001) 32080569-32085609 protein_coding
ENSMUST00000112000 (Dph3-004) 32084696-32085609 protein_coding
ENSMUST00000112001 (Dph3-003) 32080569-32085609 nonsense_mediated_decay
ENSMUST00000124303 (Dph3-005) 32082758-32085609 protein_coding
ENSMUST00000144149 (Dph3-006) 32082876-32085286 retained_intron
ENSMUST00000167796 (Dph3-007) 32082872-32085692 processed_transcript
ENSMUSG00000021906 (Oxnad1)
oxidoreductase NAD-binding domain containing 1 		ENSMUST00000022462 (Oxnad1-001) 32085413-32103202 protein_coding
ENSMUST00000164396 (Oxnad1-012) 32100818-32102282 retained_intron
ENSMUST00000164868 (Oxnad1-002) 32085811-32103202 nonsense_mediated_decay
ENSMUST00000165523 (Oxnad1-005) 32085787-32099631 nonsense_mediated_decay
ENSMUST00000166810 (Oxnad1-011) 32085374-32091676 protein_coding
ENSMUST00000168986 (Oxnad1-008) 32085834-32096624 protein_coding
ENSMUST00000169078 (Oxnad1-003) 32085834-32100042 retained_intron
ENSMUST00000169649 (Oxnad1-004) 32085877-32096584 protein_coding
ENSMUST00000170519 (Oxnad1-009) 32095399-32102655 nonsense_mediated_decay
ENSMUST00000170600 (Oxnad1-007) 32085826-32099500 protein_coding
ENSMUST00000171598 (Oxnad1-006) 32085376-32096544 protein_coding
ENSMUST00000171849 (Oxnad1-010) 32095462-32102852 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HO_0001ENSG00000131378ENST00000334133ENST00000431547ENST00000432519ENST00000441460ENST00000449415ENST00000451036ENST00000453536ENST00000470458ENST00000483671ENST00000484752ENST00000495666ENST00000607320ENSG00000154813ENST00000285082ENST00000383775ENST00000462982ENST00000488423ENSG00000154814ENST00000285083ENST00000435829ENST00000442255ENST00000452581ENST00000486267ENST00000605932ENST00000606098ENST00000607329ENSG00000270739ENST00000604305ENSG00000271964ENST00000607464ENSG00000272498ENST00000607363ENSG00000272529ENST00000606713CIL_0004HO_0002ENSMUSG00000021905ENSMUST00000022461ENSMUST00000067955ENSMUST00000112000ENSMUST00000112001ENSMUST00000124303ENSMUST00000144149ENSMUST00000167796ENSMUSG00000021906ENSMUST00000022462ENSMUST00000164396ENSMUST00000164868ENSMUST00000165523ENSMUST00000166810ENSMUST00000168986ENSMUST00000169078ENSMUST00000169649ENSMUST00000170519ENSMUST00000170600ENSMUST00000171598ENSMUST00000171849
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HO_0001ENSG00000131378ENST00000334133ENST00000432519ENST00000451036ENST00000483671ENST00000495666ENSG00000154813ENST00000285082ENST00000383775ENST00000462982ENST00000488423ENSG00000154814ENST00000285083ENST00000435829ENST00000442255ENST00000452581ENST00000605932ENST00000606098ENSG00000270739ENST00000604305ENSG00000271964ENST00000607464ENSG00000272498ENST00000607363ENSG00000272529ENST00000606713CIL_0004HO_0002ENSMUSG00000021905ENSMUST00000022461ENSMUST00000067955ENSMUST00000112001ENSMUST00000124303ENSMUST00000144149ENSMUST00000167796ENSMUSG00000021906ENSMUST00000022462ENSMUST00000165523ENSMUST00000169078ENSMUST00000169649
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131378 ENST00000334133 18.985±0.00 26.840±0.00 N/A 4.669±1.19 16.584±12.00 7.895±7.02 5.608±5.14 8.214±0.00 4.271±1.64 15.188±11.29 1.374±1.10 12.367±10.27 24.567±10.00 6.241±4.75
ENST00000431547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432519 N/A 4.587±0.00 N/A 0.979±0.00 4.513±3.15 N/A N/A 2.403±0.00 3.465±0.00 N/A 1.798±0.00 8.200±1.46 N/A N/A
ENST00000441460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.773±0.00 N/A N/A
ENST00000453536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.249±0.00 1.201±0.00 N/A N/A
ENST00000484752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.425±0.00 19.725±0.00 7.008±0.00
ENST00000607320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154813 ENST00000285082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00
ENST00000383775 2.088±0.00 1.196±0.00 N/A N/A 1.543±0.67 3.784±0.00 1.151±0.27 0.964±0.69 0.883±0.54 1.320±0.21 1.165±0.67 2.176±1.13 2.547±1.53 1.537±0.04
ENST00000462982 N/A N/A N/A N/A N/A N/A N/A N/A 2.711±0.00 5.769±0.00 N/A N/A 4.622±0.23 N/A
ENST00000488423 3.130±0.00 3.145±0.00 1.046±0.00 2.222±0.39 2.783±1.59 1.529±0.38 2.231±2.03 3.427±2.36 2.301±0.08 2.347±0.66 3.786±2.68 1.649±0.36 1.772±0.53 3.617±2.61
ENSG00000154814 ENST00000285083 N/A N/A 3.365±0.00 1.106±0.00 N/A 4.949±0.00 0.507±0.16 1.356±0.00 0.741±0.00 0.233±0.00 1.296±0.72 0.429±0.06 0.321±0.07 N/A
ENST00000435829 0.981±0.00 N/A N/A 1.697±0.00 2.273±0.00 N/A 0.798±0.06 4.282±1.09 N/A N/A N/A 1.779±0.00 0.905±0.00 3.017±0.80
ENST00000442255 0.483±0.00 N/A 0.853±0.00 N/A N/A 0.168±0.00 0.536±0.00 1.137±0.00 2.417±0.00 0.808±0.00 N/A 0.756±0.25 0.477±0.05 1.605±0.84
ENST00000452581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.130±0.00 N/A 0.643±0.00 N/A
ENST00000486267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605932 N/A 2.014±0.00 N/A N/A N/A 1.254±0.00 1.495±0.00 0.915±0.00 4.252±0.00 1.333±0.00 1.140±0.00 1.620±0.38 1.183±0.41 N/A
ENST00000606098 0.232±0.00 N/A N/A N/A N/A 1.315±0.00 0.416±0.00 N/A 0.872±0.00 N/A N/A N/A N/A N/A
ENST00000607329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270739 ENST00000604305 0.058±0.00 0.097±0.00 0.162±0.00 0.061±0.02 N/A 0.029±0.00 0.007±0.00 0.102±0.00 0.162±0.00 0.013±0.00 0.120±0.00 0.331±0.00 N/A 0.026±0.01
ENSG00000271964 ENST00000607464 0.337±0.00 3.080±0.00 0.353±0.00 0.845±0.30 1.465±0.00 1.457±1.21 0.433±0.18 0.718±0.42 0.225±0.09 1.880±1.57 1.317±0.00 0.316±0.13 0.182±0.02 0.243±0.19
ENSG00000272498 ENST00000607363 0.136±0.00 0.730±0.00 0.138±0.00 0.416±0.21 0.891±0.80 N/A 0.392±0.07 0.313±0.18 0.699±0.63 1.496±1.30 0.140±0.00 0.242±0.10 N/A 0.541±0.52
ENSG00000272529 ENST00000606713 0.186±0.00 1.858±0.00 N/A 0.143±0.00 N/A 1.179±0.00 0.185±0.00 0.448±0.00 0.067±0.00 0.555±0.00 N/A 0.462±0.05 0.069±0.00 0.746±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021905 ENSMUST00000022461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.654±0.00 N/A N/A N/A
ENSMUST00000067955 4.680±0.78 3.617±0.68 5.967±0.21 7.233±1.05 3.325±0.50 4.022±0.90 4.489±0.66 4.132±0.75 3.527±1.20 3.961±1.26 3.906±0.51 5.385±0.87 3.048±0.47 2.783±0.12
ENSMUST00000112000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.217±0.49 N/A 1.232±0.00
ENSMUST00000124303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.784±4.66 N/A
ENSMUST00000144149 N/A N/A 10.785±0.00 N/A 6.705±0.00 10.561±3.15 N/A N/A 7.069±0.00 N/A N/A 13.024±1.35 19.558±3.63 9.046±0.00
ENSMUST00000167796 N/A N/A N/A N/A 11.217±2.69 N/A N/A 11.940±0.92 21.224±0.00 N/A 40.813±2.91 N/A 24.003±13.38 31.956±9.36
ENSMUSG00000021906 ENSMUST00000022462 6.032±1.06 4.167±1.59 6.120±0.01 4.536±1.51 3.608±1.31 3.880±1.24 14.707±1.04 10.229±0.92 7.509±2.47 2.913±0.99 10.581±0.83 4.031±1.21 5.214±2.48 7.264±1.04
ENSMUST00000164396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165523 8.806±0.77 7.821±0.78 N/A N/A 5.940±1.08 6.170±1.15 13.816±1.90 13.337±4.23 7.483±2.06 N/A N/A N/A N/A N/A
ENSMUST00000166810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169078 N/A 2.981±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.08 N/A N/A
ENSMUST00000169649 N/A 9.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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