C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic leucine zipper transcription factor, ATF-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286639 BATF-001 ENSG00000156127 9606 + 14:75522425-75547015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000286639
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000286639 0.426±0.00 3.519±0.00 0.619±0.00 0.196±0.00 0.316±0.02 0.464±0.00 0.528±0.00 0.260±0.19 2.527±2.25 1.969±1.06 4.591±1.93 0.163±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084S CIL_00084S_0001 VISTA 14:74936670-75538350
CIL_00085H CIL_00085H_0001 VISTA 14:74957721-75560295
CIL_0007PT CIL_0007PT_0001 VISTA 14:74957738-75560035
CIL_00000N CIL_00000N_0001 CGP 14:75427716-75547015
CIL_00024S CIL_00024S_0001 CGP 14:75522425-75663214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 ISS cytokine production
GO:0002320 ISS lymphoid progenitor cell differentiation
GO:0003677 IEA DNA binding
GO:0003700 ISS:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0030330 ISS DNA damage response, signal transduction by p53 class mediator
GO:0042832 ISS defense response to protozoan
GO:0043011 ISS myeloid dendritic cell differentiation
GO:0043565 ISS:IEA sequence-specific DNA binding
GO:0045064 ISS T-helper 2 cell differentiation
GO:0045190 ISS isotype switching
GO:0060218 ISS hematopoietic stem cell differentiation
GO:0072539 ISS T-helper 17 cell differentiation
GO:0072540 ISS T-helper 17 cell lineage commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040536 Batf-001 protein_coding Mus_musculus 0 684

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