C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) ligand 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286758 CXCL13-001 ENSG00000156234 9606 + 4:77511753-77611834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000286758
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000286758 0.027±0.00 25.075±0.00 0.013±0.00 0.320±0.27 0.647±0.46 0.288±0.00 2.100±0.00 1.467±0.55 2.258±2.00 0.362±0.25 1.701±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Y CIL_00069Y_0001 CGP 4:77511753-77819615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002467 NAS germinal center formation
GO:0002518 ISS lymphocyte chemotaxis across high endothelial venule
GO:0002544 NAS chronic inflammatory response
GO:0002920 NAS regulation of humoral immune response
GO:0005576 IDA:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006955 IC:IEA immune response
GO:0007166 IDA cell surface receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0007267 IDA cell-cell signaling
GO:0008009 IDA:IEA chemokine activity
GO:0008201 IDA heparin binding
GO:0010820 IDA positive regulation of T cell chemotaxis
GO:0017134 IDA fibroblast growth factor binding
GO:0031724 IDA CXCR5 chemokine receptor binding
GO:0031735 IDA CCR10 chemokine receptor binding
GO:0032861 ISS activation of Rap GTPase activity
GO:0033625 ISS positive regulation of integrin activation
GO:0033634 ISS positive regulation of cell-cell adhesion mediated by integrin
GO:0035754 IDA B cell chemotaxis
GO:0035768 IDA endothelial cell chemotaxis to fibroblast growth factor
GO:0035769 IEA B cell chemotaxis across high endothelial venule
GO:0042742 IDA defense response to bacterium
GO:0045765 NAS regulation of angiogenesis
GO:0046982 IDA protein heterodimerization activity
GO:0048018 IDA receptor agonist activity
GO:0048248 IPI CXCR3 chemokine receptor binding
GO:0048535 IEA lymph node development
GO:2000545 IDA negative regulation of endothelial cell chemotaxis to fibroblast growth factor

Homologs

No Homologs available.

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