C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156234-ENSG00000138767 CGP 9606 4:77511753-77819615
GeneTranscriptPositionBiotype
ENSG00000138767 (CNOT6L)
CCR4-NOT transcription complex, subunit 6-like 		ENST00000504123 (CNOT6L-001) 77713387-77819368 protein_coding
ENST00000504804 (CNOT6L-007) 77720238-77819376 nonsense_mediated_decay
ENST00000505983 (CNOT6L-008) 77726166-77742472 protein_coding
ENST00000506166 (CNOT6L-003) 77742203-77819366 processed_transcript
ENST00000508371 (CNOT6L-009) 77728877-77731881 retained_intron
ENST00000512485 (CNOT6L-005) 77720230-77819615 protein_coding
ENST00000515441 (CNOT6L-006) 77756862-77819390 protein_coding
ENST00000515506 (CNOT6L-004) 77718021-77819063 protein_coding
ENSG00000156234 (CXCL13)
chemokine (C-X-C motif) ligand 13 		ENST00000286758 (CXCL13-001) 77511753-77611834 protein_coding
ENST00000506590 (CXCL13-002) 77605832-77610922 retained_intron
CIL_00069Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023078-ENSMUSG00000034724 CGP 10090 5:95956928-96164171
GeneTranscriptPositionBiotype
ENSMUSG00000023078 (Cxcl13)
chemokine (C-X-C motif) ligand 13 		ENSMUST00000023840 (Cxcl13-201) 95956928-95961067 protein_coding
ENSMUSG00000034724 (Cnot6l)
CCR4-NOT transcription complex, subunit 6-like 		ENSMUST00000036646 (Cnot6l-002) 96075589-96161755 nonsense_mediated_decay
ENSMUST00000113005 (Cnot6l-201) 96075737-96161755 protein_coding
ENSMUST00000122003 (Cnot6l-003) 96076801-96161547 protein_coding
ENSMUST00000129646 (Cnot6l-007) 96106299-96161742 protein_coding
ENSMUST00000137066 (Cnot6l-009) 96105610-96131060 retained_intron
ENSMUST00000137207 (Cnot6l-006) 96131097-96164171 protein_coding
ENSMUST00000141383 (Cnot6l-008) 96131061-96161871 protein_coding
ENSMUST00000152490 (Cnot6l-005) 96075576-96086933 retained_intron
ENSMUST00000154500 (Cnot6l-004) 96131208-96161763 protein_coding
ENSMUST00000155901 (Cnot6l-001) 96070333-96161990 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069Y_0001ENSG00000138767ENST00000504123ENST00000504804ENST00000505983ENST00000506166ENST00000508371ENST00000512485ENST00000515441ENST00000515506ENSG00000156234ENST00000286758ENST00000506590CIL_00069Y_0002ENSMUSG00000023078ENSMUST00000023840ENSMUSG00000034724ENSMUST00000036646ENSMUST00000113005ENSMUST00000122003ENSMUST00000129646ENSMUST00000137066ENSMUST00000137207ENSMUST00000141383ENSMUST00000152490ENSMUST00000154500ENSMUST00000155901
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069Y_0001ENSG00000138767ENST00000504123ENST00000512485ENST00000515506ENSG00000156234ENST00000286758ENST00000506590CIL_00069Y_0002ENSMUSG00000023078ENSMUST00000023840ENSMUSG00000034724ENSMUST00000036646ENSMUST00000113005ENSMUST00000122003ENSMUST00000152490ENSMUST00000155901
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138767 ENST00000504123 N/A 1.756±0.00 N/A 0.823±0.14 1.982±0.60 N/A 0.668±0.00 N/A N/A N/A N/A 1.850±1.88 0.572±0.13 0.689±0.22
ENST00000504804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512485 N/A N/A 2.801±0.00 1.964±0.00 3.071±0.00 N/A 1.275±0.00 3.481±0.00 N/A N/A 2.750±0.00 N/A N/A N/A
ENST00000515441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515506 N/A N/A N/A N/A 1.324±0.00 N/A N/A N/A 1.293±0.90 N/A N/A 1.379±0.00 1.624±0.76 2.813±0.00
ENSG00000156234 ENST00000286758 0.027±0.00 25.075±0.00 N/A 0.013±0.00 0.320±0.27 0.647±0.46 N/A 0.288±0.00 2.100±0.00 1.467±0.55 N/A 2.258±2.00 0.362±0.25 1.701±0.14
ENST00000506590 0.018±0.00 N/A N/A 0.102±0.00 N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023078 ENSMUST00000023840 0.568±0.22 0.176±0.03 1.389±0.32 0.046±0.04 23.397±9.55 4.170±0.89 1.799±0.92 2.146±1.40 0.484±0.40 5.741±3.21 1.184±2.54 0.536±0.35 0.229±0.13 0.108±0.03
ENSMUSG00000034724 ENSMUST00000036646 N/A 1.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113005 2.876±0.89 2.064±0.74 N/A N/A 3.407±0.71 2.438±0.78 1.609±0.17 2.670±0.60 1.683±0.38 3.654±0.82 N/A 2.353±0.87 4.780±1.21 1.808±0.80
ENSMUST00000122003 N/A N/A N/A N/A 3.088±1.07 N/A N/A N/A N/A N/A N/A 1.555±0.00 7.802±0.00 1.995±0.00
ENSMUST00000129646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152490 N/A 3.660±0.19 N/A N/A 2.258±0.73 3.535±1.66 N/A N/A 1.278±0.00 N/A N/A 4.550±0.81 N/A 0.626±0.00
ENSMUST00000154500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155901 1.589±0.62 N/A 4.062±0.44 3.053±0.95 1.826±1.02 1.621±0.49 1.506±0.47 2.654±0.84 2.040±0.70 3.002±0.51 1.406±0.39 2.512±1.11 1.700±0.82 0.471±0.13

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