C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289788 ZSCAN23-001 ENSG00000187987 9606 - 6:28432655-28443467 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLungOvaryTestisENST00000289788
Transcript ID Bladder Breast Colon Heart Kidney Lung Ovary Testis
ENST00000289788 0.406±0.00 0.022±0.00 0.848±0.00 0.020±0.00 0.036±0.00 0.696±0.00 0.210±0.13 0.043±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 0 209
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 0 209
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 3e-37 161
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 3e-37 161
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 3e-37 161
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 3e-37 161
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 2e-35 156
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 4e-31 141
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 4e-31 141
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 4e-31 141
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 5e-30 137
ENSMUST00000085664 Zfp433-201 protein_coding Mus_musculus 0.0000000002 73

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