C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070785 Zkscan3-003 ENSMUSG00000021327 10090 - 13:21387013-21402713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070785
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070785 3.495±0.28 6.396±0.00 7.867±1.87 6.438±2.76 5.742±0.00 3.392±0.61 7.284±1.09 3.256±0.10 2.993±0.50 6.675±2.51 3.833±0.87 1.607±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0003682 ISS chromatin binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006914 IEA autophagy
GO:0007040 ISS lysosome organization
GO:0010507 ISS negative regulation of autophagy
GO:0043565 ISS sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:2000773 ISS negative regulation of cellular senescence

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219478 ZNF500-001 protein_coding Homo_sapiens 0 193
ENST00000240727 ZSCAN18-003 protein_coding Homo_sapiens 3e-22 111
ENST00000252211 ZKSCAN3-201 protein_coding Homo_sapiens 0 1201
ENST00000252463 ZSCAN10-001 protein_coding Homo_sapiens 2e-24 119
ENST00000259883 PGBD1-001 protein_coding Homo_sapiens 4e-21 108
ENST00000262941 ZSCAN25-201 protein_coding Homo_sapiens 6e-27 126
ENST00000273320 ZKSCAN7-001 protein_coding Homo_sapiens 3e-33 148
ENST00000282326 ZSCAN1-001 protein_coding Homo_sapiens 3e-16 92
ENST00000289788 ZSCAN23-001 protein_coding Homo_sapiens 3e-37 161
ENST00000292450 ZSCAN21-001 protein_coding Homo_sapiens 3e-35 154
ENST00000294753 ZNF496-001 protein_coding Homo_sapiens 3e-34 152
ENST00000306346 ZNF396-001 protein_coding Homo_sapiens 2e-29 135
ENST00000326775 ZKSCAN5-005 protein_coding Homo_sapiens 4e-37 161
ENST00000326804 ZNF274-015 protein_coding Homo_sapiens 9e-17 94
ENST00000329665 ZSCAN22-001 protein_coding Homo_sapiens 5e-17 95
ENST00000330236 ZKSCAN8-001 protein_coding Homo_sapiens 4e-25 122
ENST00000334075 ZNF197-004 nonsense_mediated_decay Homo_sapiens 2e-22 111
ENST00000334715 ZSCAN25-202 protein_coding Homo_sapiens 2e-26 126
ENST00000337673 ZNF394-001 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000341464 ZKSCAN3-002 protein_coding Homo_sapiens 0 876
ENST00000341840 ZKSCAN7-002 protein_coding Homo_sapiens 1e-33 148
ENST00000344387 ZNF197-006 protein_coding Homo_sapiens 3e-22 111
ENST00000345813 ZNF274-010 protein_coding Homo_sapiens 1e-16 94
ENST00000361028 ZSCAN12-001 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000377255 ZKSCAN3-001 protein_coding Homo_sapiens 0 1201
ENST00000377294 ZKSCAN4-001 protein_coding Homo_sapiens 0 1153
ENST00000383744 ZNF197-005 protein_coding Homo_sapiens 2e-22 111
ENST00000383745 ZNF197-003 protein_coding Homo_sapiens 3e-22 111
ENST00000391700 ZSCAN1-002 protein_coding Homo_sapiens 1e-16 92
ENST00000394150 ZSCAN25-002 nonsense_mediated_decay Homo_sapiens 1e-26 126
ENST00000394152 ZSCAN25-001 protein_coding Homo_sapiens 2e-26 126
ENST00000394170 ZKSCAN5-001 protein_coding Homo_sapiens 5e-37 161
ENST00000394177 ZNF394-005 processed_transcript Homo_sapiens 6.99949e-42 174
ENST00000396058 ZNF197-001 protein_coding Homo_sapiens 5e-22 111
ENST00000396827 ZSCAN12-201 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000396878 ZNF213-001 protein_coding Homo_sapiens 1e-36 159
ENST00000416391 ZNF213-201 protein_coding Homo_sapiens 1e-36 159
ENST00000418719 ZKSCAN7-005 nonsense_mediated_decay Homo_sapiens 1e-33 148
ENST00000421553 ZSCAN26-201 protein_coding Homo_sapiens 5e-35 154
ENST00000424679 ZNF274-001 protein_coding Homo_sapiens 1e-16 94
ENST00000426306 ZNF394-002 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000426540 ZKSCAN7-004 protein_coding Homo_sapiens 2e-33 148
ENST00000431636 ZKSCAN7-003 protein_coding Homo_sapiens 1e-33 148
ENST00000438937 ZSCAN21-002 protein_coding Homo_sapiens 1e-35 154
ENST00000451158 ZKSCAN5-004 protein_coding Homo_sapiens 3e-37 161
ENST00000452236 ZBED9-001 protein_coding Homo_sapiens 2e-35 156
ENST00000454175 ZKSCAN5-002 nonsense_mediated_decay Homo_sapiens 6e-37 161
ENST00000456748 ZSCAN21-004 protein_coding Homo_sapiens 3e-35 154
ENST00000457389 ZKSCAN8-003 protein_coding Homo_sapiens 1e-25 122
ENST00000466948 ZSCAN25-008 processed_transcript Homo_sapiens 2e-27 126
ENST00000477297 ZSCAN21-003 processed_transcript Homo_sapiens 1e-35 154
ENST00000477903 ZNF496-006 processed_transcript Homo_sapiens 6e-35 152
ENST00000478225 ZNF496-005 processed_transcript Homo_sapiens 6e-35 152
ENST00000481424 ZSCAN25-003 retained_intron Homo_sapiens 2e-26 126
ENST00000481881 ZNF394-004 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000481983 ZSCAN23-002 nonsense_mediated_decay Homo_sapiens 1e-37 161
ENST00000485576 ZNF394-003 retained_intron Homo_sapiens 9.99967e-42 174
ENST00000508341 ZBED9-001 protein_coding Homo_sapiens 1e-35 156
ENST00000526291 ZBED9-004 processed_transcript Homo_sapiens 9e-34 147
ENST00000536028 ZKSCAN8-004 nonsense_mediated_decay Homo_sapiens 5e-26 122
ENST00000538082 ZSCAN10-004 protein_coding Homo_sapiens 1e-24 119
ENST00000545009 ZNF500-008 protein_coding Homo_sapiens 0 193
ENST00000571903 ZSCAN10-002 retained_intron Homo_sapiens 1e-24 119
ENST00000572647 ZNF213-006 protein_coding Homo_sapiens 5e-37 159
ENST00000574902 ZNF213-003 protein_coding Homo_sapiens 1e-36 159
ENST00000574928 ZNF213-002 retained_intron Homo_sapiens 2e-36 159
ENST00000576416 ZNF213-005 protein_coding Homo_sapiens 8e-37 159
ENST00000576483 ZSCAN10-006 protein_coding Homo_sapiens 5e-25 119
ENST00000576863 ZNF213-004 nonsense_mediated_decay Homo_sapiens 1e-36 159
ENST00000576985 ZSCAN10-005 protein_coding Homo_sapiens 9e-25 119
ENST00000577059 ZSCAN10-007 retained_intron Homo_sapiens 4e-25 119
ENST00000585522 ZNF396-005 protein_coding Homo_sapiens 4e-30 135
ENST00000586585 ZNF396-003 retained_intron Homo_sapiens 2e-29 135
ENST00000586687 ZNF396-004 protein_coding Homo_sapiens 8e-30 135
ENST00000588602 ZNF500-004 protein_coding Homo_sapiens 0 193
ENST00000589332 ZNF396-002 protein_coding Homo_sapiens 1e-29 135
ENST00000589422 ZNF500-002 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000594191 ZSCAN18-004 retained_intron Homo_sapiens 1e-22 111
ENST00000594839 ZNF274-011 protein_coding Homo_sapiens 9e-16 88
ENST00000598497 ZSCAN18-005 retained_intron Homo_sapiens 6e-22 111
ENST00000600318 ZSCAN18-006 retained_intron Homo_sapiens 2e-22 111
ENST00000600404 ZSCAN18-001 protein_coding Homo_sapiens 2e-22 111
ENST00000600845 ZSCAN18-011 protein_coding Homo_sapiens 8e-23 111
ENST00000600897 ZSCAN18-009 protein_coding Homo_sapiens 1e-22 111
ENST00000601144 ZSCAN18-002 protein_coding Homo_sapiens 2e-22 111
ENST00000601162 ZSCAN1-003 protein_coding Homo_sapiens 1e-16 92
ENST00000605008 CTC-523E23.9-001 processed_pseudogene Homo_sapiens 8e-22 108
ENST00000606198 ZKSCAN8-002 nonsense_mediated_decay Homo_sapiens 1e-25 122
ENST00000610905 ZNF274-009 protein_coding Homo_sapiens 1e-16 94
ENST00000615674 RP5-874C20.7-001 processed_pseudogene Homo_sapiens 1e-16 90
ENST00000615675 ZNF274-006 retained_intron Homo_sapiens 5e-17 94
ENST00000617168 ZSCAN26-002 protein_coding Homo_sapiens 1e-35 154
ENST00000617501 ZNF274-014 protein_coding Homo_sapiens 1e-16 94
ENST00000619307 ZNF274-004 retained_intron Homo_sapiens 6e-17 94
ENST00000619937 ZSCAN26-001 protein_coding Homo_sapiens 5e-35 154
ENST00000621145 ZNF274-003 retained_intron Homo_sapiens 6e-17 94
ENST00000623276 ZSCAN26-005 protein_coding Homo_sapiens 3e-35 154

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