C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290663 MED8-002 ENSG00000159479 9606 - 1:43383917-43389808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290663 4.845±0.00 3.601±0.00 0.950±0.00 3.072±0.00 7.049±0.00 3.885±0.23 5.701±0.85 5.128±0.00 5.854±0.00 1.889±0.28 4.216±1.78 6.541±3.39 4.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B4 CIL_0005B4_0002 CGP 1:43383917-43452650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016567 IEA protein ubiquitination
GO:0016592 IDA:IEA mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019229 Med8-001 protein_coding Mus_musculus 0 1072
ENSMUST00000084319 Med8-003 protein_coding Mus_musculus 0 819
ENSMUST00000135201 Med8-009 processed_transcript Mus_musculus 0 784
ENSMUST00000144577 Med8-005 protein_coding Mus_musculus 0 658
ENSMUST00000106384 Med8-201 protein_coding Mus_musculus 0 606
ENSMUST00000073881 Med8-002 protein_coding Mus_musculus 0 606
ENSMUST00000130421 Med8-008 processed_transcript Mus_musculus 0 531
ENSMUST00000126089 Med8-004 protein_coding Mus_musculus 0 446
ENSMUST00000152633 Med8-006 processed_transcript Mus_musculus 0 364

Loading