C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialidase 3 (membrane sialidase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294064 NEU3-001 ENSG00000162139 9606 + 11:74988134-75010907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryTestisENST00000294064
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000294064 2.067±0.00 1.236±0.00 0.098±0.00 0.245±0.00 1.616±0.00 0.131±0.00 0.537±0.00 0.777±0.00 1.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0001 VISTA 11:74770295-75374240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004308 IDA exo-alpha-sialidase activity
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 IDA carbohydrate metabolic process
GO:0006665 TAS sphingolipid metabolic process
GO:0006687 TAS glycosphingolipid metabolic process
GO:0006689 IDA ganglioside catabolic process
GO:0009313 IDA oligosaccharide catabolic process
GO:0016997 IDA alpha-sialidase activity
GO:0044281 TAS small molecule metabolic process
GO:0052794 ISS exo-alpha-(2->3)-sialidase activity
GO:0052795 IEA exo-alpha-(2->6)-sialidase activity
GO:0052796 ISS exo-alpha-(2->8)-sialidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036331 Neu3-201 protein_coding Mus_musculus 0 802

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