C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialidase 3 (membrane sialidase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162139 NEU3 9606 + 11:74988134-75018893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294064 NEU3-001 74988134-75010907 protein_coding
  ENST00000526068 NEU3-006 74988925-74990163 protein_coding
  ENST00000529024 NEU3-005 74988698-75018893 protein_coding
  ENST00000531509 NEU3-002 74988279-75007084 protein_coding
  ENST00000531619 NEU3-007 74988943-75005469 protein_coding
  ENST00000532963 NEU3-004 74988934-75006834 protein_coding
  ENST00000534628 NEU3-008 74988944-74995043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000294064ENST00000532963
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000294064 2.067±0.00 N/A 1.236±0.00 0.098±0.00 0.245±0.00 1.616±0.00 0.131±0.00 0.537±0.00 N/A 0.777±0.00 1.887±0.00
ENST00000532963 N/A 0.826±0.00 N/A 1.199±0.00 N/A N/A N/A 1.026±0.00 5.874±0.00 1.445±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0001 VISTA 11:74770295-75374240

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004308 IDA exo-alpha-sialidase activity
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 IDA carbohydrate metabolic process
GO:0006665 TAS sphingolipid metabolic process
GO:0006687 TAS glycosphingolipid metabolic process
GO:0006689 IDA ganglioside catabolic process
GO:0008152 IEA metabolic process
GO:0009313 IDA oligosaccharide catabolic process
GO:0016997 IDA alpha-sialidase activity
GO:0044281 TAS small molecule metabolic process
GO:0052794 ISS exo-alpha-(2->3)-sialidase activity
GO:0052795 IEA exo-alpha-(2->6)-sialidase activity
GO:0052796 ISS exo-alpha-(2->8)-sialidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010047 neu3.2 sialidase 3, tandem duplicate 2 protein_coding Danio_rerio
ENSDARG00000058327 neu3.3 sialidase 3, tandem duplicate 3 protein_coding Danio_rerio
ENSDARG00000096368 neu3.5 sialidase 3, tandem duplicate 5 protein_coding Danio_rerio
ENSDARG00000096381 neu3.4 sialidase 3, tandem duplicate 4 protein_coding Danio_rerio
ENSDARG00000096382 neu3.1 sialidase 3, tandem duplicate 1 protein_coding Danio_rerio
ENSMUSG00000035239 Neu3 neuraminidase 3 protein_coding Mus_musculus

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