C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hematopoietic prostaglandin D synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295256 HPGDS-001 ENSG00000163106 9606 - 4:94298535-94342876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295256
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295256 0.248±0.00 1.407±0.00 0.084±0.00 0.324±0.02 1.464±0.42 0.942±0.54 0.576±0.00 0.209±0.00 0.378±0.33 1.808±0.49 0.196±0.00 0.596±0.25 10.299±4.96 0.816±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KQ CIL_0000KQ_0001 CGP 4:94207611-94342876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0004364 IEA glutathione transferase activity
GO:0004667 IDA prostaglandin-D synthase activity
GO:0005509 IDA calcium ion binding
GO:0005515 IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006693 IDA prostaglandin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007165 NAS signal transduction
GO:0007626 TAS locomotory behavior
GO:0019369 TAS arachidonic acid metabolic process
GO:0019371 TAS cyclooxygenase pathway
GO:0042803 IPI protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:1901687 TAS glutathione derivative biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031982 Hpgds-001 protein_coding Mus_musculus 0 549
ENSMUST00000170252 Hpgds-002 retained_intron Mus_musculus 0 337

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