C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholecystokinin A receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295589 CCKAR-001 ENSG00000163394 9606 - 4:26481400-26490462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyTestisENST00000295589
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Testis
ENST00000295589 0.011±0.00 0.012±0.00 0.096±0.00 0.235±0.00 0.128±0.10 0.073±0.00 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TR CIL_0002TR_0002 CGP 4:26163455-26490462
CIL_0002TQ CIL_0002TQ_0002 CGP 4:26481400-26755351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0004930 IEA G-protein coupled receptor activity
GO:0004951 IEA cholecystokinin receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007200 TAS phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007204 TAS positive regulation of cytosolic calcium ion concentration
GO:0007409 IEA axonogenesis
GO:0007584 TAS response to nutrient
GO:0007586 TAS digestion
GO:0007631 TAS feeding behavior
GO:0016021 IEA integral component of membrane
GO:0030900 IEA forebrain development
GO:0038188 IEA cholecystokinin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031093 Cckar-201 protein_coding Mus_musculus 0 1478
ENSDART00000110647 CCKBR (2 of 2)-201 protein_coding Danio_rerio 2e-36 158
ENSDART00000109224 CCKBR (1 of 2)-001 protein_coding Danio_rerio 2e-17 95

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