C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002TR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052091-ENSDARG00000052089 CGP 7955 7:62723096-62887024
GeneTranscriptPositionBiotype
ENSDARG00000052089 (CR352260.1)
Uncharacterized protein
ENSDART00000073872 (CR352260.1-201) 62872602-62887024 protein_coding
ENSDARG00000052091 (rbpjb)
recombination signal binding protein for immunoglobulin kappa J region b
ENSDART00000092580 (rbpjb-001) 62723096-62849573 protein_coding
CIL_0002TR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168214-ENSG00000163394 CGP 9606 4:26163455-26490462
GeneTranscriptPositionBiotype
ENSG00000163394 (CCKAR)
cholecystokinin A receptor
ENST00000295589 (CCKAR-001) 26481400-26490462 protein_coding
ENSG00000168214 (RBPJ)
recombination signal binding protein for immunoglobulin kappa J region
ENST00000342295 (RBPJ-201) 26319710-26435128 protein_coding
ENST00000342320 (RBPJ-003) 26362436-26435131 protein_coding
ENST00000345843 (RBPJ-001) 26319710-26431066 protein_coding
ENST00000348160 (RBPJ-030) 26320800-26431066 protein_coding
ENST00000355476 (RBPJ-202) 26320807-26435128 protein_coding
ENST00000361572 (RBPJ-002) 26320563-26431007 protein_coding
ENST00000504423 (RBPJ-026) 26428720-26430851 protein_coding
ENST00000504907 (RBPJ-010) 26362436-26431156 protein_coding
ENST00000504938 (RBPJ-020) 26362530-26420725 protein_coding
ENST00000505727 (RBPJ-028) 26430146-26431174 retained_intron
ENST00000505958 (RBPJ-006) 26321365-26406203 protein_coding
ENST00000506903 (RBPJ-025) 26420570-26424994 retained_intron
ENST00000506956 (RBPJ-011) 26319662-26415613 protein_coding
ENST00000507561 (RBPJ-007) 26321602-26431183 protein_coding
ENST00000507574 (RBPJ-015) 26322209-26424383 protein_coding
ENST00000509158 (RBPJ-013) 26320807-26406265 protein_coding
ENST00000510725 (RBPJ-027) 26428613-26430195 retained_intron
ENST00000510778 (RBPJ-029) 26272607-26424426 protein_coding
ENST00000511401 (RBPJ-022) 26321014-26415640 processed_transcript
ENST00000511451 (RBPJ-021) 26362476-26420838 retained_intron
ENST00000511546 (RBPJ-018) 26359691-26420553 protein_coding
ENST00000512351 (RBPJ-004) 26163455-26415605 protein_coding
ENST00000512671 (RBPJ-005) 26319686-26420725 protein_coding
ENST00000513182 (RBPJ-024) 26321007-26415583 nonsense_mediated_decay
ENST00000514380 (RBPJ-009) 26320725-26430457 retained_intron
ENST00000514656 (RBPJ-019) 26362446-26368145 processed_transcript
ENST00000514675 (RBPJ-016) 26322870-26420563 protein_coding
ENST00000514730 (RBPJ-014) 26322164-26420571 protein_coding
ENST00000514807 (RBPJ-012) 26320787-26406263 protein_coding
ENST00000515023 (RBPJ-023) 26321020-26415640 processed_transcript
ENST00000515573 (RBPJ-017) 26343140-26424479 protein_coding
CIL_0002TR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039191-ENSMUSG00000029193 CGP 10090 5:53555779-53707704
GeneTranscriptPositionBiotype
ENSMUSG00000029193 (Cckar)
cholecystokinin A receptor
ENSMUST00000031093 (Cckar-201) 53698485-53707704 protein_coding
ENSMUSG00000039191 (Rbpj)
recombination signal binding protein for immunoglobulin kappa J region
ENSMUST00000037618 (Rbpj-201) 53590215-53657445 protein_coding
ENSMUST00000087360 (Rbpj-202) 53555779-53657445 protein_coding
ENSMUST00000113865 (Rbpj-203) 53590574-53657445 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TR_0001ENSDARG00000052089ENSDART00000073872ENSDARG00000052091ENSDART00000092580CIL_0002TR_0002ENSG00000163394ENST00000295589ENSG00000168214ENST00000342295ENST00000342320ENST00000345843ENST00000348160ENST00000355476ENST00000361572ENST00000504423ENST00000504907ENST00000504938ENST00000505727ENST00000505958ENST00000506903ENST00000506956ENST00000507561ENST00000507574ENST00000509158ENST00000510725ENST00000510778ENST00000511401ENST00000511451ENST00000511546ENST00000512351ENST00000512671ENST00000513182ENST00000514380ENST00000514656ENST00000514675ENST00000514730ENST00000514807ENST00000515023ENST00000515573CIL_0002TR_0003ENSMUSG00000029193ENSMUST00000031093ENSMUSG00000039191ENSMUST00000037618ENSMUST00000087360ENSMUST00000113865
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TR_0001ENSDARG00000052089ENSDART00000073872ENSDARG00000052091ENSDART00000092580CIL_0002TR_0002ENSG00000163394ENST00000295589ENSG00000168214ENST00000342295ENST00000342320ENST00000348160ENST00000355476ENST00000361572ENST00000504907ENST00000507561ENST00000511401CIL_0002TR_0003ENSMUSG00000029193ENSMUST00000031093ENSMUSG00000039191ENSMUST00000037618ENSMUST00000087360ENSMUST00000113865
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052089 ENSDART00000073872 N/A N/A N/A 0.566±0.40 N/A N/A 10.284±0.00 0.617±0.00 N/A N/A 0.106±0.00 N/A N/A N/A
ENSDARG00000052091 ENSDART00000092580 N/A N/A N/A N/A N/A N/A 1.034±0.18 0.474±0.11 0.166±0.00 N/A 0.476±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163394 ENST00000295589 0.011±0.00 0.012±0.00 N/A 0.096±0.00 0.235±0.00 0.128±0.10 N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.022±0.00
ENSG00000168214 ENST00000342295 N/A N/A N/A N/A N/A N/A 1.009±0.00 N/A N/A N/A N/A 2.775±0.20 2.893±0.44 9.626±0.00
ENST00000342320 N/A N/A N/A 3.462±0.00 5.931±0.00 2.034±0.00 1.357±0.24 N/A 3.078±1.67 N/A 0.982±0.67 3.163±1.77 6.729±0.23 N/A
ENST00000345843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000348160 15.649±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355476 3.912±0.00 3.773±0.00 N/A 3.551±0.00 11.335±0.00 7.172±0.00 1.548±0.00 3.115±0.00 0.612±0.00 2.942±0.33 N/A 5.050±5.51 N/A 2.593±0.00
ENST00000361572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.084±0.00
ENST00000504423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504907 N/A N/A N/A N/A N/A N/A 1.263±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000504938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507561 N/A 14.205±0.00 2.841±0.00 8.746±0.00 11.632±2.15 6.247±0.00 1.967±0.00 4.849±0.00 15.277±0.00 7.844±0.00 3.378±0.00 6.768±0.00 N/A 13.509±0.00
ENST00000507574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.706±0.00 N/A N/A N/A
ENST00000511451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029193 ENSMUST00000031093 0.011±0.00 0.557±0.07 0.022±0.01 0.185±0.11 0.025±0.02 2.792±0.72 0.214±0.15 20.357±2.09 0.053±0.03 22.566±5.11 N/A 0.128±0.08 0.026±0.02 0.027±0.01
ENSMUSG00000039191 ENSMUST00000037618 N/A N/A N/A 0.458±0.00 N/A 0.825±0.00 N/A N/A N/A N/A 0.460±0.02 N/A N/A 0.393±0.00
ENSMUST00000087360 4.617±1.19 9.704±2.65 N/A 0.695±0.00 13.418±1.39 4.755±0.98 3.413±0.00 4.229±2.65 2.066±0.90 5.857±2.19 N/A 18.970±6.05 N/A 2.560±0.00
ENSMUST00000113865 9.433±3.43 2.650±0.38 11.162±4.40 11.870±7.80 8.960±4.90 2.061±0.63 4.416±1.69 2.274±1.78 2.788±1.64 7.884±2.80 4.266±0.40 9.175±4.39 7.043±2.69 1.814±1.13

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