C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain protein I3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297290 BRI3-001 ENSG00000164713 9606 + 7:98281675-98291524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297290 109.332±0.00 73.783±0.00 5.293±0.00 12.912±6.07 91.678±0.00 78.998±0.00 56.078±51.85 49.433±28.61 63.488±56.07 93.869±83.82 217.028±207.65 197.323±205.50 284.251±135.83 140.298±52.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053B CIL_00053B_0001 CGP 7:98214624-98310441
CIL_0005L6 CIL_0005L6_0002 CGP 7:98252379-98401068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056578 Bri3-001 protein_coding Mus_musculus 0 678
ENSMUST00000110695 Bri3-003 protein_coding Mus_musculus 0 396
ENSMUST00000155491 Bri3-002 nonsense_mediated_decay Mus_musculus 0 388

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