C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 169
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299563 RNF169-001 ENSG00000166439 9606 + 11:74748868-74842413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299563 2.215±0.00 1.681±0.00 0.911±0.00 2.233±0.59 2.089±1.44 2.140±0.00 0.910±0.18 1.241±0.08 0.849±0.47 2.361±0.57 2.286±1.15 2.686±0.48 0.839±0.24 1.895±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005886 IDA plasma membrane
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031491 IDA nucleosome binding
GO:0035861 IDA site of double-strand break
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070530 IDA K63-linked polyubiquitin binding
GO:2000780 IMP negative regulation of double-strand break repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080817 Rnf169-001 protein_coding Mus_musculus 0 1827

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