C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299601 LEO1-001 ENSG00000166477 9606 - 15:51938025-51971806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000299601
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000299601 8.364±0.00 1.581±0.00 4.789±1.79 3.904±1.58 6.006±1.81 2.850±0.00 6.746±3.66 5.327±1.97 1.861±0.00 8.124±4.00 5.500±2.38 7.945±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001711 ISS endodermal cell fate commitment
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006378 IMP mRNA polyadenylation
GO:0010390 IDA histone monoubiquitination
GO:0016055 IEA Wnt signaling pathway
GO:0016593 IDA Cdc73/Paf1 complex
GO:0019827 IDA stem cell maintenance
GO:0031442 IMP positive regulation of mRNA 3'-end processing
GO:0032968 IDA positive regulation of transcription elongation from RNA polymerase II promoter
GO:0033523 IDA histone H2B ubiquitination
GO:0045638 IDA negative regulation of myeloid cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048937 Leo1-201 protein_coding Mus_musculus 0 2320

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