C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | post-GPI attachment to proteins 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000300730  |
PGAP2-003 |
ENSG00000148985 |
9606 | + |
11:3797819-3826352  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005K0 | CIL_0005K0_0001 | CGP | 11:3665587-3797792 |
| CIL_0005K9 | CIL_0005K9_0001 | CGP | 11:3671083-3826371 |
| CIL_0005KW | CIL_0005KW_0001 | CGP | 11:3797724-3840983 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000139 | ISS | Golgi membrane |
| GO:0005789 | ISS | endoplasmic reticulum membrane |
| GO:0006506 | ISS | GPI anchor biosynthetic process |
| GO:0008565 | ISS | protein transporter activity |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120879
|
Pgap2-029 | protein_coding | Mus_musculus | 0 | 1050 |
|
ENSMUST00000156529
|
Pgap2-002 | protein_coding | Mus_musculus | 0 | 1050 |
|
ENSMUST00000033292
|
Pgap2-003 | protein_coding | Mus_musculus | 0 | 994 |
|
ENSMUST00000150891
|
Pgap2-005 | processed_transcript | Mus_musculus | 0 | 839 |
|
ENSMUST00000134621
|
Pgap2-025 | retained_intron | Mus_musculus | 0 | 811 |
|
ENSMUST00000120119
|
Pgap2-007 | protein_coding | Mus_musculus | 0 | 809 |
|
ENSMUST00000137303
|
Pgap2-027 | protein_coding | Mus_musculus | 0 | 806 |
|
ENSMUST00000153020
|
Pgap2-013 | protein_coding | Mus_musculus | 0 | 782 |
|
ENSMUST00000138479
|
Pgap2-014 | protein_coding | Mus_musculus | 0 | 780 |
|
ENSMUST00000119816
|
Pgap2-024 | nonsense_mediated_decay | Mus_musculus | 0 | 756 |
|
ENSMUST00000145352
|
Pgap2-023 | nonsense_mediated_decay | Mus_musculus | 0 | 754 |
|
ENSMUST00000140058
|
Pgap2-022 | nonsense_mediated_decay | Mus_musculus | 0 | 536 |
|
ENSMUST00000143759
|
Pgap2-018 | retained_intron | Mus_musculus | 0 | 514 |
|
ENSMUST00000127804
|
Pgap2-011 | retained_intron | Mus_musculus | 0 | 514 |
|
ENSMUST00000142873
|
Pgap2-021 | protein_coding | Mus_musculus | 0 | 497 |
|
ENSMUST00000133311
|
Pgap2-028 | processed_transcript | Mus_musculus | 0 | 483 |
|
ENSMUST00000129340
|
Pgap2-006 | nonsense_mediated_decay | Mus_musculus | 0 | 481 |
|
ENSMUST00000138753
|
Pgap2-020 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000126914
|
Pgap2-016 | protein_coding | Mus_musculus | 0 | 422 |
|
ENSMUST00000143541
|
Pgap2-012 | protein_coding | Mus_musculus | 0 | 339 |
|
ENSMUST00000140631
|
Pgap2-030 | protein_coding | Mus_musculus | 7e-37 | 159 |
