C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302177 FOXA3-001 ENSG00000170608 9606 + 19:45864260-45873797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000302177
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000302177 0.315±0.00 0.044±0.00 0.031±0.00 5.003±0.00 1.006±0.00 19.355±0.00 0.364±0.22 0.494±0.61 0.032±0.00 0.617±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044B CIL_00044B_0002 CGP 19:45863989-45886170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001678 TAS cellular glucose homeostasis
GO:0003677 IEA DNA binding
GO:0003700 IEA:IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007283 IEA spermatogenesis
GO:0008134 IEA transcription factor binding
GO:0009267 IEA cellular response to starvation
GO:0016568 IEA chromatin modification
GO:0019904 IEA protein domain specific binding
GO:0030154 IEA cell differentiation
GO:0031018 TAS endocrine pancreas development
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 IMP transcription regulatory region DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036018 Foxa3-001 protein_coding Mus_musculus 0 1096
ENSMUST00000044380 Foxa1-201 protein_coding Mus_musculus 0 339
ENSMUST00000153321 Foxa3-002 processed_transcript Mus_musculus 0 316

Loading