C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036018 Foxa3-001 ENSMUSG00000040891 10090 - 7:19013284-19023538 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000036018
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000036018 0.106±0.03 0.083±0.04 38.214±3.04 0.085±0.02 21.127±5.66 0.236±0.09 1.606±0.91 11.175±0.54 0.946±0.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001678 IMP cellular glucose homeostasis
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0007283 IMP spermatogenesis
GO:0008134 IEA transcription factor binding
GO:0009267 IMP cellular response to starvation
GO:0016568 IEA chromatin modification
GO:0019904 IEA protein domain specific binding
GO:0030154 IEA cell differentiation
GO:0031018 TAS endocrine pancreas development
GO:0043565 IDA sequence-specific DNA binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250448 FOXA1-001 protein_coding Homo_sapiens 0 333
ENST00000302177 FOXA3-001 protein_coding Homo_sapiens 0 1096
ENST00000545425 FOXA1-002 processed_transcript Homo_sapiens 0 333

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