C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jun B proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302754 JUNB-001 ENSG00000171223 9606 + 19:12791496-12793315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302754
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302754 200.174±0.00 240.240±0.00 12.508±0.00 23.164±14.78 140.275±111.76 64.493±53.32 15.091±11.02 30.315±28.88 52.918±20.76 227.392±203.76 46.592±23.42 530.121±665.41 131.522±24.97 43.289±24.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_00016T CIL_00016T_0002 CGP 19:12763003-12872740
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 TAS chromatin
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001570 IEA vasculogenesis
GO:0001649 IEA osteoblast differentiation
GO:0001701 IEA in utero embryonic development
GO:0001829 IEA trophectodermal cell differentiation
GO:0003677 TAS:IEA DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 TAS transcription coactivator activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007565 IEA female pregnancy
GO:0009416 IEA response to light stimulus
GO:0009612 IEA response to mechanical stimulus
GO:0009987 IEA cellular process
GO:0010467 TAS gene expression
GO:0014070 IEA response to organic cyclic compound
GO:0030316 IEA osteoclast differentiation
GO:0032570 IEA response to progesterone
GO:0032870 IEA cellular response to hormone stimulus
GO:0033687 IEA osteoblast proliferation
GO:0034097 IEA response to cytokine
GO:0042493 IEA response to drug
GO:0043434 IEA response to peptide hormone
GO:0043565 IEA sequence-specific DNA binding
GO:0045597 IEA positive regulation of cell differentiation
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0046697 IEA decidualization
GO:0051412 IEA response to corticosterone
GO:0051591 IEA response to cAMP
GO:0051726 IEA regulation of cell cycle
GO:0060136 IEA embryonic process involved in female pregnancy
GO:0060716 IEA labyrinthine layer blood vessel development
GO:0071277 IEA cellular response to calcium ion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064922 Junb-201 protein_coding Mus_musculus 0 1893

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