C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tigger transposable element derived 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304337 TIGD4-001 ENSG00000169989 9606 - 4:152769354-152779764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304337 0.008±0.00 0.012±0.00 0.262±0.00 0.308±0.11 0.078±0.04 0.109±0.06 0.044±0.00 0.196±0.02 0.031±0.00 0.074±0.03 0.074±0.00 0.415±0.26 0.041±0.00 2.733±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PH CIL_0004PH_0001 CGP 4:152687727-152918463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062623 Tigd4-201 protein_coding Mus_musculus 0 1504

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