C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164144-ENSG00000164144 CGP 9606 4:152687727-152918463
GeneTranscriptPositionBiotype
ENSG00000164144 (ARFIP1)
ADP-ribosylation factor interacting protein 1 		ENST00000353617 (ARFIP1-201) 152779937-152911909 protein_coding
ENST00000356064 (ARFIP1-004) 152779985-152910244 protein_coding
ENST00000405727 (ARFIP1-003) 152779971-152910664 protein_coding
ENST00000429148 (ARFIP1-002) 152779939-152911074 protein_coding
ENST00000451320 (ARFIP1-001) 152779937-152912357 protein_coding
ENST00000509413 (ARFIP1-005) 152780109-152810386 processed_transcript
ENST00000510497 (ARFIP1-011) 152911570-152918463 processed_transcript
ENST00000510831 (ARFIP1-007) 152779993-152810388 processed_transcript
ENST00000511289 (ARFIP1-008) 152850643-152881173 processed_transcript
ENST00000513361 (ARFIP1-009) 152850648-152881111 processed_transcript
ENST00000514499 (ARFIP1-010) 152883245-152910378 processed_transcript
ENST00000618090 (ARFIP1-202) 152687727-152911909 protein_coding
ENSG00000169989 (TIGD4)
tigger transposable element derived 4 		ENST00000304337 (TIGD4-001) 152769354-152779764 protein_coding
ENSG00000250980 (RP11-529H22.1)
 ENST00000511141 (RP11-529H22.1-001) 152796063-152796831 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004PH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074513-ENSMUSG00000074513 CGP 10090 3:84496093-85887516
GeneTranscriptPositionBiotype
ENSMUSG00000028085 (Pet112)
glutamyl-tRNA(Gln) amidotransferase, subunit B 		ENSMUST00000029726 (Pet112-002) 85574195-85654158 processed_transcript
ENSMUST00000107672 (Pet112-003) 85574119-85646579 protein_coding
ENSMUST00000107674 (Pet112-004) 85574127-85652833 protein_coding
ENSMUST00000127348 (Pet112-001) 85574119-85655622 protein_coding
ENSMUST00000134273 (Pet112-005) 85574132-85576041 processed_transcript
ENSMUSG00000028086 (Fbxw7)
F-box and WD-40 domain protein 7 		ENSMUST00000029727 (Fbxw7-002) 84952146-84977645 protein_coding
ENSMUST00000107675 (Fbxw7-005) 84925480-84979197 protein_coding
ENSMUST00000107678 (Fbxw7-003) 84864145-84979198 protein_coding
ENSMUST00000107679 (Fbxw7-001) 84815268-84979198 protein_coding
ENSMUST00000151410 (Fbxw7-004) 84815478-84977682 retained_intron
ENSMUSG00000031286 (Glt28d2)
glycosyltransferase 28 domain containing 2 		ENSMUST00000033643 (Glt28d2-001) 85869849-85887516 protein_coding
ENSMUST00000125216 (Glt28d2-002) 85801047-85887518 processed_transcript
ENSMUSG00000047819 (Tigd4)
tigger transposable element derived 4 		ENSMUST00000062623 (Tigd4-201) 84593574-84597032 protein_coding
ENSMUSG00000051000 (Fam160a1)
family with sequence similarity 160, member A1 		ENSMUST00000094148 (Fam160a1-201) 85660065-85741389 protein_coding
ENSMUST00000118408 (Fam160a1-001) 85660063-85746266 protein_coding
ENSMUST00000119077 (Fam160a1-002) 85660063-85722474 protein_coding
ENSMUST00000126445 (Fam160a1-003) 85660061-85673988 retained_intron
ENSMUSG00000056498 (Tmem154)
transmembrane protein 154 		ENSMUST00000107682 (Tmem154-001) 84666192-84704575 protein_coding
ENSMUST00000128344 (Tmem154-004) 84690223-84692544 retained_intron
ENSMUST00000129417 (Tmem154-003) 84666370-84685555 processed_transcript
ENSMUST00000134890 (Tmem154-002) 84666210-84685665 retained_intron
ENSMUSG00000074513 (Arfip1)
ADP-ribosylation factor interacting protein 1 		ENSMUST00000098990 (Arfip1-001) 84496093-84582534 protein_coding
ENSMUST00000107687 (Arfip1-002) 84497204-84582485 protein_coding
ENSMUST00000143514 (Arfip1-003) 84497736-84582625 protein_coding
ENSMUST00000146862 (Arfip1-005) 85817123-85887368 retained_intron
ENSMUST00000154148 (Arfip1-004) 84496426-85887516 protein_coding
ENSMUSG00000080424 (Mir466k)
microRNA 466k 		ENSMUST00000116774 (Mir466k-201) 85467377-85467498 miRNA
ENSMUSG00000085527 (Gm15535)
predicted gene 15535 		ENSMUST00000128872 (Gm15535-002) 85558180-85573854 processed_transcript
ENSMUST00000148478 (Gm15535-001) 85556046-85573945 processed_transcript
ENSMUSG00000085625 (Gm8813)
predicted gene 8813 		ENSMUST00000155930 (Gm8813-001) 84552858-84553452 processed_pseudogene
ENSMUSG00000099995 (RP23-94M23.1)
RIKEN cDNA 1700036G14 gene 		ENSMUST00000189046 (RP23-94M23.1-001) 85317519-85332030 lincRNA
ENSMUSG00000100840 (RP23-94M23.2)
 ENSMUST00000185907 (RP23-94M23.2-001) 85360228-85361174 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PH_0001ENSG00000164144ENST00000353617ENST00000356064ENST00000405727ENST00000429148ENST00000451320ENST00000509413ENST00000510497ENST00000510831ENST00000511289ENST00000513361ENST00000514499ENST00000618090ENSG00000169989ENST00000304337ENSG00000250980ENST00000511141CIL_0004PH_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PH_0001ENSG00000164144ENST00000353617ENST00000356064ENST00000405727ENST00000429148ENST00000451320ENST00000514499ENST00000618090ENSG00000169989ENST00000304337ENSG00000250980ENST00000511141CIL_0004PH_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164144 ENST00000353617 6.941±0.00 3.733±0.00 0.570±0.00 3.245±1.41 4.645±1.10 4.626±1.22 1.513±0.41 3.513±1.98 2.327±0.99 2.100±0.88 1.171±0.00 4.965±1.59 3.748±0.19 5.259±2.33
ENST00000356064 N/A N/A 1.333±0.00 0.762±0.00 N/A N/A N/A N/A 1.363±0.00 5.159±0.00 0.339±0.00 N/A N/A N/A
ENST00000405727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.736±0.00 N/A N/A
ENST00000429148 N/A N/A N/A N/A 2.101±0.00 N/A N/A N/A 2.503±0.00 N/A 0.301±0.00 2.790±0.00 N/A N/A
ENST00000451320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.192±0.00 N/A N/A
ENST00000509413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514499 N/A N/A N/A N/A N/A N/A N/A 2.285±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618090 N/A N/A N/A N/A N/A 1.281±0.00 1.321±0.00 N/A 0.543±0.00 N/A N/A 2.928±0.00 1.758±0.72 0.889±0.00
ENSG00000169989 ENST00000304337 0.008±0.00 0.012±0.00 0.262±0.00 0.308±0.11 0.078±0.04 0.109±0.06 0.044±0.00 0.196±0.02 0.031±0.00 0.074±0.03 0.074±0.00 0.415±0.26 0.041±0.00 2.733±1.16
ENSG00000250980 ENST00000511141 N/A 0.162±0.00 N/A 0.188±0.09 0.242±0.00 0.027±0.00 0.077±0.04 N/A N/A 0.055±0.00 0.013±0.00 0.078±0.03 N/A 0.030±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028085 ENSMUST00000029726 3.452±0.94 3.806±0.59 1.765±0.25 2.879±2.01 2.738±0.70 1.250±0.30 4.513±0.62 9.404±2.00 4.262±1.67 0.854±0.27 3.349±0.22 4.109±1.87 3.292±0.69 3.663±1.94
ENSMUST00000107672 2.644±0.17 3.128±0.85 N/A 0.884±0.00 N/A 0.926±0.00 2.189±0.00 6.757±1.53 3.521±1.38 N/A N/A 2.093±1.00 0.921±0.28 2.301±0.19
ENSMUST00000107674 1.474±0.20 1.074±0.00 0.940±0.00 N/A 1.821±0.58 0.445±0.00 N/A N/A 3.030±0.00 0.600±0.00 N/A 1.601±0.52 N/A N/A
ENSMUST00000127348 1.739±0.49 0.886±0.17 1.301±0.01 0.914±0.15 3.342±1.47 0.912±0.28 4.009±0.87 4.960±0.60 1.416±0.48 0.947±0.39 3.564±0.51 1.889±0.49 0.880±0.10 0.891±0.43
ENSMUST00000134273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028086 ENSMUST00000029727 N/A N/A N/A 18.411±16.00 1.485±0.00 N/A N/A N/A N/A N/A N/A 3.268±0.82 N/A N/A
ENSMUST00000107675 0.744±0.23 N/A N/A N/A 1.216±0.57 1.961±0.50 11.165±1.62 0.956±0.33 0.793±0.35 2.141±0.29 4.691±0.68 3.096±0.61 N/A N/A
ENSMUST00000107678 0.402±0.00 N/A 1.381±0.09 2.788±0.60 1.076±0.00 0.933±0.00 N/A 0.587±0.26 0.602±0.21 N/A N/A 4.107±1.34 1.746±0.68 2.804±1.62
ENSMUST00000107679 1.531±0.25 N/A 2.624±0.04 3.700±2.08 1.459±0.00 N/A N/A 0.669±0.20 0.729±0.35 N/A 1.160±0.22 5.425±0.00 3.165±1.82 2.958±0.93
ENSMUST00000151410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031286 ENSMUST00000033643 N/A N/A N/A N/A 3.126±0.91 2.640±0.56 1.087±0.13 2.267±0.35 1.717±0.18 3.352±0.37 1.937±0.08 1.440±0.23 N/A 0.481±0.00
ENSMUST00000125216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.460±0.30 N/A N/A
ENSMUSG00000047819 ENSMUST00000062623 0.074±0.06 N/A 0.217±0.06 0.016±0.01 0.040±0.00 0.061±0.02 N/A 0.016±0.00 0.008±0.01 0.056±0.03 3.050±0.54 0.096±0.05 0.009±0.00 0.032±0.03
ENSMUSG00000051000 ENSMUST00000094148 2.374±0.42 2.419±0.30 2.908±0.01 0.215±0.12 8.910±3.89 6.128±0.76 9.282±2.09 3.133±0.65 0.939±0.85 4.757±0.56 11.591±2.34 3.943±1.36 1.596±0.78 0.382±0.14
ENSMUST00000118408 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.011±0.49 N/A N/A
ENSMUST00000119077 N/A 0.657±0.00 N/A N/A 2.397±0.77 1.473±0.28 1.616±0.00 0.718±0.12 0.434±0.16 0.836±0.00 N/A 1.186±0.38 N/A 0.060±0.00
ENSMUST00000126445 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.17 N/A N/A N/A N/A 0.070±0.00
ENSMUSG00000056498 ENSMUST00000107682 0.954±0.34 0.725±0.31 15.675±2.09 0.202±0.13 2.181±0.49 1.231±0.34 0.561±0.05 0.314±0.09 0.762±0.89 5.096±1.24 0.158±0.05 0.544±0.25 0.660±0.32 0.025±0.02
ENSMUST00000128344 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A 1.894±0.00 4.482±0.00 0.038±0.00
ENSMUST00000129417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134890 N/A N/A N/A N/A 0.854±0.00 0.274±0.00 N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENSMUSG00000074513 ENSMUST00000098990 N/A N/A 9.643±1.49 5.469±1.61 1.961±0.00 N/A 2.584±0.62 N/A 2.749±0.93 N/A 3.711±0.99 8.924±5.93 10.917±2.35 1.336±0.60
ENSMUST00000107687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143514 4.698±1.21 4.595±1.21 9.191±0.00 3.731±0.00 6.932±1.26 7.298±1.58 1.477±0.20 5.439±0.00 1.688±0.00 6.036±1.03 N/A 7.028±4.53 20.400±13.30 N/A
ENSMUST00000146862 N/A 5.826±1.18 N/A N/A 18.456±7.41 10.932±3.90 10.509±0.82 N/A 5.159±0.75 N/A N/A N/A N/A N/A
ENSMUST00000154148 0.988±0.00 2.357±0.00 N/A N/A 2.268±0.48 3.238±1.14 0.978±0.11 N/A N/A N/A 1.543±0.21 1.631±0.03 N/A 0.399±0.00
ENSMUSG00000080424 ENSMUST00000116774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2583.675±2.23 N/A N/A
ENSMUSG00000085527 ENSMUST00000128872 0.806±0.26 0.311±0.04 N/A N/A 1.155±0.51 N/A N/A N/A 0.205±0.10 0.521±0.17 0.464±0.00 1.070±0.43 0.403±0.16 0.687±0.11
ENSMUST00000148478 0.289±0.14 0.281±0.02 0.351±0.01 0.891±0.77 0.441±0.18 0.209±0.06 0.233±0.05 0.134±0.09 0.213±0.14 0.347±0.05 0.177±0.03 0.420±0.28 0.159±0.11 0.428±0.16
ENSMUSG00000085625 ENSMUST00000155930 0.093±0.01 N/A 0.140±0.08 0.071±0.04 N/A N/A N/A 0.099±0.00 0.018±0.01 0.122±0.00 N/A N/A 0.130±0.04 0.138±0.06
ENSMUSG00000099995 ENSMUST00000189046 N/A N/A N/A N/A N/A N/A N/A 0.126±0.04 N/A N/A N/A N/A N/A 20.419±1.06
ENSMUSG00000100840 ENSMUST00000185907 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A 0.039±0.00 N/A N/A N/A

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