C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylglycine alpha-amidating monooxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304400 PAM-029 ENSG00000145730 9606 + 5:102866010-103029110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304400
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304400 4.968±0.00 1.884±0.00 4.876±0.00 5.830±0.00 43.814±23.41 0.423±0.00 13.880±0.00 6.360±0.00 6.185±2.35 6.441±0.73 13.513±0.00 2.392±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WC CIL_0007WC_0001 VISTA 5:102363369-102968199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001519 IDA peptide amidation
GO:0003824 IEA catalytic activity
GO:0004497 IEA monooxygenase activity
GO:0004504 IDA peptidylglycine monooxygenase activity
GO:0004598 IDA peptidylamidoglycolate lyase activity
GO:0005507 IEA copper ion binding
GO:0005515 IPI:IEA protein binding
GO:0008270 IDA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016715 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0031418 IEA L-ascorbic acid binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058762 Pam-001 protein_coding Mus_musculus 0 3310
ENSMUST00000097625 Pam-201 protein_coding Mus_musculus 0 3290
ENSMUST00000161567 Pam-002 protein_coding Mus_musculus 0 1611
ENSMUST00000162803 Pam-008 retained_intron Mus_musculus 0 1038
ENSMUST00000159585 Pam-012 retained_intron Mus_musculus 0 531
ENSMUST00000159041 Pam-009 protein_coding Mus_musculus 0 484
ENSMUST00000162681 Pam-011 protein_coding Mus_musculus 0 462
ENSMUST00000161071 Pam-006 retained_intron Mus_musculus 0 444
ENSMUST00000159428 Pam-004 retained_intron Mus_musculus 0 390
ENSMUST00000159841 Pam-007 protein_coding Mus_musculus 0 322
ENSMUST00000159131 Pam-010 retained_intron Mus_musculus 0 292
ENSMUST00000162426 Pam-005 processed_transcript Mus_musculus 0 217

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