C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ral guanine nucleotide dissociation stimulator-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304685 RGL1-001 ENSG00000143344 9606 + 1:183636085-183928531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartOvaryTestisENST00000304685
Transcript ID Brain Colon Heart Ovary Testis
ENST00000304685 5.837±1.73 0.791±0.00 1.395±0.57 0.288±0.00 1.771±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IE CIL_0005IE_0001 CGP 1:183636085-183928531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 NAS:IEA small GTPase mediated signal transduction
GO:0008321 NAS Ral guanyl-nucleotide exchange factor activity
GO:0032852 NAS positive regulation of Ral GTPase activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111859 Rgl1-002 protein_coding Mus_musculus 0 3293
ENSMUST00000027760 Rgl1-001 protein_coding Mus_musculus 0 2976
ENSMUST00000111857 Rgl1-003 protein_coding Mus_musculus 0 2784
ENSMUST00000128251 Rgl1-006 processed_transcript Mus_musculus 0 438
ENSMUST00000149536 Rgl1-005 nonsense_mediated_decay Mus_musculus 0 436
ENSMUST00000188395 Rgl1-004 retained_intron Mus_musculus 0 292

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