C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase H (cyclophilin H)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304979 PPIH-001 ENSG00000171960 9606 + 1:42658425-42676758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304979
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304979 12.669±0.00 21.956±0.00 2.399±0.00 9.096±2.09 7.497±5.48 8.427±4.77 4.263±3.43 4.427±3.18 3.407±1.93 7.700±5.48 1.408±0.78 21.839±1.84 20.896±5.03 11.377±4.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA:IDA peptidyl-prolyl cis-trans isomerase activity
GO:0005515 IPI protein binding
GO:0005681 IC spliceosomal complex
GO:0005737 IDA cytoplasm
GO:0006457 IEA protein folding
GO:0006461 TAS protein complex assembly
GO:0016018 TAS cyclosporin A binding
GO:0016607 IDA nuclear speck
GO:0043021 IDA ribonucleoprotein complex binding
GO:0045070 IMP positive regulation of viral genome replication
GO:0046540 IDA U4/U6 x U5 tri-snRNP complex
GO:0071001 IDA U4/U6 snRNP

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106318 Ppih-001 protein_coding Mus_musculus 0 813
ENSMUST00000056458 Ppih-004 protein_coding Mus_musculus 0 789
ENSMUST00000106321 Ppih-003 protein_coding Mus_musculus 0 789
ENSMUST00000122204 Gm7879-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000177906 RP23-255H12.1-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000147077 Ppih-006 protein_coding Mus_musculus 0 717
ENSMUST00000106317 Ppih-002 protein_coding Mus_musculus 0 693
ENSMUST00000120901 Gm11585-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000076982 Gm17728-201 protein_coding Mus_musculus 0 571
ENSMUST00000106319 Ppih-005 protein_coding Mus_musculus 0 521

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