C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2E 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306627 UBE2E1-001 ENSG00000170142 9606 + 3:23805903-23891316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306627 8.514±0.00 9.801±0.00 1.086±0.00 13.283±9.45 8.956±7.28 17.294±12.28 12.365±9.46 6.805±0.00 7.569±2.06 16.368±14.81 4.514±3.95 14.975±9.10 31.290±8.25 11.702±7.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0000209 IDA protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0007094 TAS mitotic spindle assembly checkpoint
GO:0010390 IDA histone monoubiquitination
GO:0016567 IDA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0032020 IDA ISG15-protein conjugation
GO:0033523 IDA histone H2B ubiquitination
GO:0042296 IDA ISG15 ligase activity
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022296 Ube2e1-001 protein_coding Mus_musculus 0 1378
ENSMUST00000118507 Gm12722-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000132374 Nkiras1-001 protein_coding Mus_musculus 0 464
ENSMUST00000160266 Ube2e1-003 retained_intron Mus_musculus 0 329
ENSMUST00000161580 Ube2e1-002 retained_intron Mus_musculus 0 268

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