C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307126 GTPBP2-011 ENSG00000172432 9606 - 6:43620490-43629162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307126
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307126 16.260±0.00 9.670±0.00 4.232±0.00 9.964±0.00 3.778±2.72 6.036±0.00 6.646±0.00 0.903±0.00 26.431±0.00 16.052±0.00 7.088±0.47 7.897±3.62 11.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0008150 ND biological_process
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024748 Gtpbp2-001 protein_coding Mus_musculus 0 3055
ENSMUST00000169383 Gtpbp2-002 nonsense_mediated_decay Mus_musculus 0 2817
ENSMUST00000172170 Gtpbp2-004 protein_coding Mus_musculus 0 2407
ENSMUST00000169955 Gtpbp2-009 processed_transcript Mus_musculus 0 1098
ENSMUST00000169778 Gtpbp2-011 retained_intron Mus_musculus 0 1044
ENSMUST00000167681 Gtpbp2-014 retained_intron Mus_musculus 0 551
ENSMUST00000166663 Gtpbp2-017 retained_intron Mus_musculus 0 545
ENSMUST00000169918 Gtpbp2-010 retained_intron Mus_musculus 0 479
ENSMUST00000167404 Gtpbp2-008 retained_intron Mus_musculus 0 470
ENSMUST00000169798 Gtpbp2-016 retained_intron Mus_musculus 0 459
ENSMUST00000166701 Gtpbp2-015 protein_coding Mus_musculus 0 444
ENSMUST00000166252 Gtpbp2-013 nonsense_mediated_decay Mus_musculus 0 436
ENSMUST00000163941 Gtpbp2-012 retained_intron Mus_musculus 0 411
ENSMUST00000171901 Gtpbp2-007 processed_transcript Mus_musculus 0 374
ENSMUST00000166563 Gtpbp2-006 protein_coding Mus_musculus 0 252
ENSMUST00000164338 Gtpbp2-005 processed_transcript Mus_musculus 0 248
ENSMUST00000165686 Gtpbp2-003 processed_transcript Mus_musculus 0 209

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