C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308521 APOBEC3F-001 ENSG00000128394 9606 + 22:39040604-39053910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonLiverLungMuscleOvaryPlacentaTestisENST00000308521
Transcript ID Adipose Adrenal Bladder Brain Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000308521 0.685±0.00 1.993±0.00 0.274±0.00 0.264±0.00 0.444±0.00 0.477±0.00 1.385±0.00 0.104±0.00 1.622±1.07 0.884±0.23 1.704±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0002230 IDA positive regulation of defense response to virus by host
GO:0003723 IDA RNA binding
GO:0003824 IEA catalytic activity
GO:0004126 IDA cytidine deaminase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IDA:IEA zinc ion binding
GO:0009972 IDA cytidine deamination
GO:0010529 IDA negative regulation of transposition
GO:0016553 IDA base conversion or substitution editing
GO:0016814 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
GO:0030529 IDA ribonucleoprotein complex
GO:0030895 TAS apolipoprotein B mRNA editing enzyme complex
GO:0044822 IDA poly(A) RNA binding
GO:0045071 IDA negative regulation of viral genome replication
GO:0045087 IDA innate immune response
GO:0045869 IDA negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
GO:0048525 IDA negative regulation of viral process
GO:0051607 IDA defense response to virus
GO:0070383 IDA DNA cytosine deamination
GO:0080111 IDA DNA demethylation

Homologs

No Homologs available.

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