C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC28 protein kinase regulatory subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308987 CKS1B-001 ENSG00000173207 9606 + 1:154974699-154979249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308987 15.716±0.00 8.748±0.00 0.926±0.00 2.767±2.40 13.018±9.72 6.836±4.51 2.281±1.91 8.453±4.80 5.537±4.32 7.638±6.93 0.911±0.47 37.509±26.76 30.855±8.13 18.025±2.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 TAS regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007049 IEA cell cycle
GO:0008283 TAS cell proliferation
GO:0016538 IEA cyclin-dependent protein serine/threonine kinase regulator activity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029679 Cks1b-001 protein_coding Mus_musculus 0 532
ENSMUST00000076896 Cks1brt-201 protein_coding Mus_musculus 0 460
ENSMUST00000107422 Cks1b-003 protein_coding Mus_musculus 0 409
ENSMUST00000183484 Cks1b-002 nonsense_mediated_decay Mus_musculus 0 313

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