C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC28 protein kinase 1b, retrogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076896 Cks1brt-201 ENSMUSG00000062687 10090 + 8:85171322-85173622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000076896
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000076896 0.025±0.00 0.080±0.01 0.010±0.00 0.009±0.01 0.014±0.00 0.024±0.01 0.011±0.01 0.056±0.03 0.039±0.04 0.008±0.00 0.028±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0016538 IEA cyclin-dependent protein serine/threonine kinase regulator activity
GO:0045859 IEA regulation of protein kinase activity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308987 CKS1B-001 protein_coding Homo_sapiens 0 460
ENST00000368436 CKS1B-003 protein_coding Homo_sapiens 0 279
ENST00000368439 CKS1B-002 protein_coding Homo_sapiens 0 377
ENST00000424932 CKS1BP6-001 processed_pseudogene Homo_sapiens 0 305
ENST00000471245 CKS1B-005 processed_transcript Homo_sapiens 0 377
ENST00000473344 CKS1B-007 processed_transcript Homo_sapiens 0 320
ENST00000474215 CKS1B-006 processed_transcript Homo_sapiens 0 377
ENST00000477676 CKS1B-004 processed_transcript Homo_sapiens 0 379
ENST00000497342 RP11-192N10.2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000522230 CKS1BP7-001 processed_pseudogene Homo_sapiens 0 302
ENST00000533906 RP11-727A23.8-001 processed_pseudogene Homo_sapiens 0 315
ENST00000555221 RP11-404P21.9-001 processed_pseudogene Homo_sapiens 0 316
ENST00000600888 RP11-95I19.3-001 processed_pseudogene Homo_sapiens 0 322

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