C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenazine biosynthesis-like protein domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309049 PBLD-001 ENSG00000108187 9606 - 10:68283064-68332906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENST00000309049
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENST00000309049 0.557±0.00 13.403±0.00 0.702±0.00 0.443±0.00 4.002±0.00 24.317±0.00 0.733±0.00 0.092±0.00 1.157±0.00 0.605±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H3 CIL_0000H3_0002 CGP 10:68282660-68343191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0009058 IEA biosynthetic process
GO:0010633 IMP negative regulation of epithelial cell migration
GO:0010719 IMP negative regulation of epithelial to mesenchymal transition
GO:0016853 IEA isomerase activity
GO:0030277 IMP maintenance of gastrointestinal epithelium
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0050680 IMP negative regulation of epithelial cell proliferation
GO:0060392 IGI negative regulation of SMAD protein import into nucleus
GO:0060394 IMP negative regulation of pathway-restricted SMAD protein phosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111336 Sdhc-001 protein_coding Mus_musculus 0.00001 57

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