C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate dehydrogenase complex, subunit C, integral membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111336 Sdhc-001 ENSMUSG00000058076 10090 - 1:171127165-171150603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111336 23.122±10.79 16.658±0.92 21.572±8.15 10.458±5.83 24.919±10.98 25.847±6.54 47.386±10.94 35.010±14.24 22.226±8.27 13.215±1.80 18.660±11.18 16.633±4.78 6.506±3.91 6.129±1.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000104 IEA succinate dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0009055 IEA electron carrier activity
GO:0016021 IEA integral component of membrane
GO:0020037 ISS heme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216743 ARHGAP5-005 retained_intron Homo_sapiens 0.000004 58
ENST00000234453 PLEKHA3-001 protein_coding Homo_sapiens 0.000005 60
ENST00000264436 ADD2-001 protein_coding Homo_sapiens 0.00005 57
ENST00000267620 FBLN5-002 protein_coding Homo_sapiens 0.000003 58
ENST00000309049 PBLD-001 protein_coding Homo_sapiens 0.00001 57
ENST00000335247 CYP27C1-001 protein_coding Homo_sapiens 0.00002 57
ENST00000336578 PBLD-002 protein_coding Homo_sapiens 0.00001 57
ENST00000343325 ZNF791-001 protein_coding Homo_sapiens 0.0000000008 71
ENST00000355524 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000358769 PBLD-201 protein_coding Homo_sapiens 0.00001 57
ENST00000368656 FAM229B-001 protein_coding Homo_sapiens 0.000001 60
ENST00000368813 EDRF1-002 protein_coding Homo_sapiens 0.0000004 60
ENST00000370205 ALG14-001 protein_coding Homo_sapiens 0.00005 57
ENST00000371243 GPR110-003 protein_coding Homo_sapiens 0.00000004 64
ENST00000379376 RASSF2-201 protein_coding Homo_sapiens 0.00003 57
ENST00000379400 RASSF2-001 protein_coding Homo_sapiens 0.00003 57
ENST00000379808 NWD1-201 protein_coding Homo_sapiens 0.00001 58
ENST00000392455 CCDC50-001 protein_coding Homo_sapiens 0.00001 58
ENST00000409299 PXMP4-001 protein_coding Homo_sapiens 0.0001 55
ENST00000412217 PAPOLG-005 protein_coding Homo_sapiens 0.00003 57
ENST00000419892 GPR110-008 retained_intron Homo_sapiens 0.0000003 64
ENST00000446165 ZNF791-002 protein_coding Homo_sapiens 0.000000001 71
ENST00000450068 HSP90AB7P-001 processed_pseudogene Homo_sapiens 0.00001 57
ENST00000454762 TJAP1-005 protein_coding Homo_sapiens 0.000005 58
ENST00000459750 MCF2L2-006 retained_intron Homo_sapiens 0.00006 55
ENST00000462716 ELMSAN1-005 retained_intron Homo_sapiens 0.00009 55
ENST00000466805 SLC26A8-003 retained_intron Homo_sapiens 0.00005 55
ENST00000472182 FAM221B-004 protein_coding Homo_sapiens 0.000001 58
ENST00000473880 LRWD1-002 retained_intron Homo_sapiens 0.000002 60
ENST00000475860 MTERF4-012 retained_intron Homo_sapiens 0.000004 57
ENST00000477771 GPR110-007 processed_transcript Homo_sapiens 0.00000003 64
ENST00000478553 RASSF2-002 processed_transcript Homo_sapiens 0.00003 57
ENST00000480046 METTL2B-002 protein_coding Homo_sapiens 0.000008 58
ENST00000482662 GGCX-012 processed_transcript Homo_sapiens 0.000001 58
ENST00000488149 MCF2L2-005 retained_intron Homo_sapiens 0.0001 55
ENST00000491283 GPR110-006 retained_intron Homo_sapiens 0.00000004 64
ENST00000495893 PHC3-008 protein_coding Homo_sapiens 0.0000004 64
ENST00000513517 NUDT6-003 retained_intron Homo_sapiens 0.0001 55
ENST00000514642 CCDC30-015 retained_intron Homo_sapiens 0.00001 58
ENST00000518257 TEX15-003 processed_transcript Homo_sapiens 0.000003 57
ENST00000518676 NWD1-002 nonsense_mediated_decay Homo_sapiens 0.00001 58
ENST00000519882 ZNF706-003 protein_coding Homo_sapiens 0.00006 53
ENST00000520347 ZNF706-002 protein_coding Homo_sapiens 0.0002 53
ENST00000520454 ZNF706-013 protein_coding Homo_sapiens 0.00003 53
ENST00000521272 ZNF706-004 protein_coding Homo_sapiens 0.00005 53
ENST00000522969 ARHGEF10-007 retained_intron Homo_sapiens 0.000003 58
ENST00000523922 ZNF706-005 protein_coding Homo_sapiens 0.00003 53
ENST00000524140 NWD1-001 protein_coding Homo_sapiens 0.00001 58
ENST00000530036 RPUSD4-008 processed_transcript Homo_sapiens 0.000003 57
ENST00000530903 RPUSD4-009 retained_intron Homo_sapiens 0.000007 57
ENST00000531971 DDX6-006 retained_intron Homo_sapiens 0.000002 60
ENST00000546474 BRF1-002 protein_coding Homo_sapiens 0.00003 58
ENST00000552788 NWD1-005 protein_coding Homo_sapiens 0.00001 58
ENST00000577053 SERPINF1-004 protein_coding Homo_sapiens 0.0000003 60
ENST00000588651 ZNF627-006 processed_transcript Homo_sapiens 0.0000003 60
ENST00000593279 ZNF627-005 processed_transcript Homo_sapiens 0.0000002 60
ENST00000600800 CARD8-029 processed_transcript Homo_sapiens 0.00006 55
ENST00000612836 FCAR-001 protein_coding Homo_sapiens 0.00001 57
ENST00000612912 TJAP1-205 protein_coding Homo_sapiens 0.000006 58
ENST00000613199 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000613473 APOOL-201 protein_coding Homo_sapiens 0.000009 58
ENST00000614226 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000615829 FCAR-001 protein_coding Homo_sapiens 0.00001 57
ENST00000619385 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000620801 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000621702 FCAR-001 protein_coding Homo_sapiens 0.000007 57
ENST00000622157 FCAR-001 protein_coding Homo_sapiens 0.00001 57
ENST00000622540 APOOL-202 protein_coding Homo_sapiens 0.000009 58
ENST00000622737 FCAR-001 protein_coding Homo_sapiens 0.00001 57

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