C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309415 SH3RF3-001 ENSG00000172985 9606 + 2:109129348-109504632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309415 4.463±0.00 4.173±0.00 0.481±0.00 1.303±0.01 2.488±0.76 1.992±1.47 3.906±0.00 1.288±1.19 0.925±0.45 3.915±3.10 0.505±0.14 1.763±1.59 3.071±0.33 4.137±1.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153031 Sh3rf3-001 protein_coding Mus_musculus 0 2303
ENSMUST00000135526 Sh3rf3-002 protein_coding Mus_musculus 0 1138
ENSMUST00000152924 Sh3rf3-005 processed_transcript Mus_musculus 0 496
ENSMUST00000148267 Sh3rf3-003 retained_intron Mus_musculus 0 412
ENSDART00000050559 sh3rf1-001 protein_coding Danio_rerio 1e-34 154

Loading