C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000050559 sh3rf1-001 ENSDARG00000070470 7955 + 20:23724673-23819066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000050559
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000050559 5.532±0.97 2.174±0.31 3.089±0.56 0.642±0.00 1.323±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KO CIL_0006KO_0001 CGP 20:23658746-23819066

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030027 IEA lamellipodium
GO:0042995 IEA cell projection
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309415 SH3RF3-001 protein_coding Homo_sapiens 1e-34 154

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