C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NACHT and WD repeat domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309447 NWD2-001 ENSG00000174145 9606 + 4:37244220-37449465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000309447
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000309447 0.910±0.00 1.238±0.26 0.045±0.03 0.054±0.00 0.031±0.01 0.054±0.00 0.030±0.00 0.094±0.00 0.019±0.01 0.012±0.00 0.083±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FE CIL_0002FE_0001 CGP 4:36281622-37449465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159584 Nwd2-001 protein_coding Mus_musculus 0 6617
ENSMUST00000162166 Nwd2-002 nonsense_mediated_decay Mus_musculus 0 1291
ENSMUST00000160066 Nwd2-003 retained_intron Mus_musculus 0 721
ENSDART00000115355 AL935029.1-201 protein_coding Danio_rerio 0 392

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