C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: engulfment and cell motility 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310758 ELMO1-001 ENSG00000155849 9606 - 7:36854361-37449249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310758
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310758 5.924±0.00 8.629±4.68 1.714±0.24 1.553±0.15 0.801±0.01 0.447±0.00 1.200±0.05 2.252±0.50 0.725±0.24 2.087±1.37 3.351±0.76 1.014±0.43

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006909 IEA phagocytosis
GO:0006911 IGI phagocytosis, engulfment
GO:0006915 NAS apoptotic process
GO:0006928 IGI cellular component movement
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016601 IGI Rac protein signal transduction
GO:0017124 IPI SH3 domain binding
GO:0030029 IEA actin filament-based process
GO:0030036 IGI actin cytoskeleton organization
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0050690 TAS regulation of defense response to virus by virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072519 Elmo1-001 protein_coding Mus_musculus 0 3024
ENSMUST00000180626 Elmo1-003 retained_intron Mus_musculus 0 1544
ENSMUST00000180767 Elmo1-004 retained_intron Mus_musculus 0 719
ENSMUST00000181429 Elmo1-002 retained_intron Mus_musculus 0 686

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