C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tensin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310858 TNS1-008 ENSG00000079308 9606 - 2:217859229-217903813 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000310858
Transcript ID Kidney
ENST00000310858 3.612±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0001 VISTA 2:217636448-218238840
CIL_0005MB CIL_0005MB_0001 CGP 2:217799789-218090581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IDA focal adhesion
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187584 Tns1-001 protein_coding Mus_musculus 0 1373
ENSMUST00000169786 Tns1-201 protein_coding Mus_musculus 0 1367
ENSMUST00000191104 Tns1-008 protein_coding Mus_musculus 0 1367
ENSMUST00000185331 Tns1-004 protein_coding Mus_musculus 0 1363
ENSMUST00000185702 Tns1-020 protein_coding Mus_musculus 0 1363
ENSMUST00000191264 Tns1-002 retained_intron Mus_musculus 0 623
ENSMUST00000188942 Tns1-003 retained_intron Mus_musculus 0 588

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