C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310955 CDC20-001 ENSG00000117399 9606 + 1:43358955-43363203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000310955
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000310955 0.493±0.00 1.385±0.00 0.298±0.00 0.905±0.14 0.937±0.03 0.113±0.00 2.638±0.00 0.796±0.67 0.141±0.00 9.759±10.48 10.404±3.07 33.372±5.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178
CIL_0005B3 CIL_0005B3_0002 CGP 1:43358955-43368074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005680 IDA anaphase-promoting complex
GO:0005737 IDA cytoplasm
GO:0005819 TAS spindle
GO:0005829 TAS cytosol
GO:0007049 TAS cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0007094 TAS mitotic spindle assembly checkpoint
GO:0008022 IPI protein C-terminus binding
GO:0016567 IEA protein ubiquitination
GO:0019899 IPI enzyme binding
GO:0031145 IDA anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031915 ISS positive regulation of synaptic plasticity
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051488 IDA activation of anaphase-promoting complex activity
GO:0090129 ISS positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006565 Cdc20-001 protein_coding Mus_musculus 0 1820
ENSMUST00000117514 Gm7856-001 processed_pseudogene Mus_musculus 0 1454
ENSMUST00000118843 Gm15043-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000151302 Cdc20-004 retained_intron Mus_musculus 0 544
ENSMUST00000183942 Cdc20-003 nonsense_mediated_decay Mus_musculus 0 357

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