C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7856
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117514 Gm7856-001 ENSMUSG00000084301 10090 - 16:91513141-91514633 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryTestisENSMUST00000117514
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000117514 0.063±0.03 0.010±0.00 0.018±0.00 0.123±0.00 0.114±0.05 0.021±0.00 0.072±0.06 0.032±0.00 0.104±0.03 0.201±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0003WY CIL_0003WY_0002 CGP 16:91485238-91565169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310955 CDC20-001 protein_coding Homo_sapiens 0 1454
ENST00000372462 CDC20-002 protein_coding Homo_sapiens 0 1454
ENST00000478882 CDC20-003 processed_transcript Homo_sapiens 0 643
ENST00000488829 CDC20P1-001 processed_pseudogene Homo_sapiens 0 1375

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