C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311413 RNF26-001 ENSG00000173456 9606 + 11:119334527-119337313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311413 9.375±0.00 11.698±0.00 1.210±0.00 4.694±2.30 6.138±4.68 5.060±2.93 2.307±1.69 4.862±3.37 4.451±3.35 3.952±2.65 5.870±0.00 9.169±4.29 15.017±3.09 9.284±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000221 CIL_000221_0002 CGP 11:119308529-119337313

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 NAS:IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056328 Rnf26-001 protein_coding Mus_musculus 0 1293
ENSMUST00000120403 Gm6184-001 processed_pseudogene Mus_musculus 0 1053
ENSMUST00000185479 Rnf26-201 protein_coding Mus_musculus 0 1050
ENSMUST00000065379 Rnf26-004 nonsense_mediated_decay Mus_musculus 0 1050
ENSMUST00000162126 Rnf26-002 nonsense_mediated_decay Mus_musculus 0 1050
ENSMUST00000097218 Gm9008-201 protein_coding Mus_musculus 0 1007

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