C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin-binding Rho activating protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311955 ABRA-001 ENSG00000174429 9606 - 8:106759483-106770245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311955 0.027±0.00 0.774±0.00 0.230±0.00 0.096±0.06 0.696±0.40 0.072±0.02 20.009±17.20 0.059±0.05 0.185±0.18 0.299±0.00 14.327±0.72 0.051±0.01 0.014±0.00 1.582±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000609 CIL_000609_0001 CGP 8:106270178-106770245
CIL_0004T0 CIL_0004T0_0002 CGP 8:106759483-107498055

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000060 IEA protein import into nucleus, translocation
GO:0003713 IEA transcription coactivator activity
GO:0003779 ISS actin binding
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0015629 ISS actin cytoskeleton
GO:0030016 IEA myofibril
GO:0030017 ISS sarcomere
GO:0035025 ISS positive regulation of Rho protein signal transduction
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051091 ISS positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054742 Abra-201 protein_coding Mus_musculus 0 1022

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