C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-glucose 6-dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316423 UGDH-001 ENSG00000109814 9606 - 4:39498755-39527618 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316423 8.321±0.00 3.428±0.00 1.642±0.00 0.966±0.00 8.568±1.41 19.284±10.65 0.975±0.07 15.870±2.70 15.297±6.38 5.251±2.42 1.115±0.00 9.321±0.33 4.871±2.81 6.310±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000278 CIL_000278_0002 CGP 4:39459000-39528311
CIL_0002TX CIL_0002TX_0002 CGP 4:39498755-39639090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001702 IEA gastrulation with mouth forming second
GO:0003979 IEA:TAS UDP-glucose 6-dehydrogenase activity
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006011 TAS UDP-glucose metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0006065 IEA UDP-glucuronate biosynthetic process
GO:0006805 TAS xenobiotic metabolic process
GO:0009055 TAS electron carrier activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044281 TAS small molecule metabolic process
GO:0051287 IEA NAD binding
GO:0052695 TAS cellular glucuronidation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031103 Ugdh-001 protein_coding Mus_musculus 0 1929
ENSMUST00000117542 Ugdh-002 protein_coding Mus_musculus 0 1297
ENSMUST00000125375 Ugdh-004 retained_intron Mus_musculus 0 887
ENSMUST00000139402 Ugdh-006 nonsense_mediated_decay Mus_musculus 0 815
ENSMUST00000121275 Gm14603-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000134123 Ugdh-003 retained_intron Mus_musculus 0 418

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