C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel flower domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316948 CACFD1-001 ENSG00000160325 9606 + 9:133459987-133470848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316948
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316948 1.666±0.00 3.127±0.00 0.179±0.00 0.707±0.53 3.487±2.79 0.620±0.56 5.639±4.98 5.314±5.07 0.267±0.00 1.441±0.00 8.030±4.61 5.510±0.02 7.922±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DA CIL_0006DA_0001 CGP 9:133414358-133470848
CIL_0006D9 CIL_0006D9_0001 CGP 9:133459965-133479137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005262 IEA calcium channel activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030285 IEA integral component of synaptic vesicle membrane
GO:0048488 IEA synaptic vesicle endocytosis
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114007 Cacfd1-002 protein_coding Mus_musculus 0 580
ENSMUST00000114006 Cacfd1-001 protein_coding Mus_musculus 0 580
ENSMUST00000114003 Cacfd1-007 protein_coding Mus_musculus 0 494
ENSMUST00000114005 Cacfd1-004 protein_coding Mus_musculus 0 351
ENSMUST00000114004 Cacfd1-003 protein_coding Mus_musculus 0 348
ENSMUST00000133126 Cacfd1-005 processed_transcript Mus_musculus 0 337
ENSMUST00000133807 Cacfd1-008 protein_coding Mus_musculus 0 261

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